RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
SSBP3-216ENST00000610401 MTX1Q13505 466 aa23.98■■□□□ 1.43
SSBP3-216ENST00000610401 ZNF771Q7L3S4 317 aaPredicted RBP23.98■■□□□ 1.43
SSBP3-216ENST00000610401 FSIP1Q8NA03 581 aa23.98■■□□□ 1.43
SSBP3-216ENST00000610401 PTPDC1A2A3K4 754 aa23.98■■□□□ 1.43
SSBP3-216ENST00000610401 GTF2F1P35269 517 aaKnown RBP eCLIP23.98■■□□□ 1.431e-6■■■■□ 23.4
SSBP3-216ENST00000610401 GCKRQ14397 625 aa23.98■■□□□ 1.43
SSBP3-216ENST00000610401 ZNF496Q96IT1 587 aaPredicted RBP23.98■■□□□ 1.43
SSBP3-216ENST00000610401 RESTQ13127 1097 aa23.97■■□□□ 1.43
SSBP3-216ENST00000610401 TNNI3KQ59H18 835 aa23.97■■□□□ 1.43
SSBP3-216ENST00000610401 CEP135Q66GS9 1140 aa23.97■■□□□ 1.43
SSBP3-216ENST00000610401 CCDC73Q6ZRK6 1079 aa23.97■■□□□ 1.43
SSBP3-216ENST00000610401 FPGT-TNNI3KV9GXZ4 949 aa23.97■■□□□ 1.43
SSBP3-216ENST00000610401 USP42Q9H9J4 1324 aaKnown RBP23.97■■□□□ 1.43
SSBP3-216ENST00000610401 KINO60870 393 aaKnown RBP23.97■■□□□ 1.43
SSBP3-216ENST00000610401 FKBP4Q02790 459 aaKnown RBP eCLIP23.97■■□□□ 1.43
SSBP3-216ENST00000610401 LMBR1LQ6UX01 489 aa23.97■■□□□ 1.43
SSBP3-216ENST00000610401 SF3A1Q15459 793 aaKnown RBP23.97■■□□□ 1.43
SSBP3-216ENST00000610401 FAM208AQ9UK61 1670 aaKnown RBP23.97■■□□□ 1.43
SSBP3-216ENST00000610401 SMC2O95347 1197 aa23.96■■□□□ 1.43
SSBP3-216ENST00000610401 CABLES1Q8TDN4 633 aa23.96■■□□□ 1.43
SSBP3-216ENST00000610401 DDX21Q9NR30 783 aaKnown RBP eCLIP23.96■■□□□ 1.43
SSBP3-216ENST00000610401 TMX1Q9H3N1 280 aa23.96■■□□□ 1.43
SSBP3-216ENST00000610401 PXDNQ92626 1479 aa23.96■■□□□ 1.43
SSBP3-216ENST00000610401 NPHP4O75161 1426 aaPredicted RBP23.95■■□□□ 1.43
SSBP3-216ENST00000610401 DMTNQ08495 405 aa23.95■■□□□ 1.43
SSBP3-216ENST00000610401 PDIA6Q15084 440 aa23.95■■□□□ 1.43
SSBP3-216ENST00000610401 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.43
SSBP3-216ENST00000610401 PLA2G4DQ86XP0 818 aa23.95■■□□□ 1.42
SSBP3-216ENST00000610401 CCDC69A6NI79 296 aa23.95■■□□□ 1.42
SSBP3-216ENST00000610401 TPM3P06753 285 aa23.95■■□□□ 1.42
SSBP3-216ENST00000610401 ZRSR1Q15695 479 aaKnown RBP23.95■■□□□ 1.42
SSBP3-216ENST00000610401 THEMISQ8N1K5 641 aaPredicted RBP23.95■■□□□ 1.42
SSBP3-216ENST00000610401 BABAM1Q9NWV8 329 aa23.95■■□□□ 1.42
SSBP3-216ENST00000610401 ZNF215Q9UL58 517 aaPredicted RBP23.95■■□□□ 1.42
SSBP3-216ENST00000610401 ZNF790Q6PG37 636 aa23.94■■□□□ 1.42
SSBP3-216ENST00000610401 CHRNA2Q15822 529 aa23.94■■□□□ 1.42
SSBP3-216ENST00000610401 FAM177A1Q8N128 213 aaPredicted RBP23.94■■□□□ 1.42
SSBP3-216ENST00000610401 DIP2BQ9P265 1576 aa23.94■■□□□ 1.42
SSBP3-216ENST00000610401 RXRAP19793 462 aa23.93■■□□□ 1.42
SSBP3-216ENST00000610401 PTPN12Q05209 780 aaKnown RBP23.93■■□□□ 1.42
SSBP3-216ENST00000610401 LRRC8AQ8IWT6 810 aa23.93■■□□□ 1.42
SSBP3-216ENST00000610401 CFAP45Q9UL16 551 aa23.93■■□□□ 1.42
SSBP3-216ENST00000610401 PTPN14Q15678 1187 aa23.93■■□□□ 1.42
SSBP3-216ENST00000610401 MCMDC2Q4G0Z9 681 aa23.93■■□□□ 1.42
SSBP3-216ENST00000610401 ELP1O95163 1332 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 GOLGA8FQ08AF8 430 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 GOLGA8DPQ0D2H9 430 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 KCNB2Q92953 911 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 ST7Q9NRC1 585 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 WASHC4Q2M389 1173 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
SSBP3-216ENST00000610401 CTDNEP1O95476 244 aa23.91■■□□□ 1.42
SSBP3-216ENST00000610401 TDRD7Q8NHU6 1098 aaKnown RBP23.91■■□□□ 1.42
SSBP3-216ENST00000610401 RAPGEF4Q8WZA2 1011 aa23.91■■□□□ 1.42
SSBP3-216ENST00000610401 TUBGCP6Q96RT7 1819 aa23.91■■□□□ 1.42
SSBP3-216ENST00000610401 HOXB7P09629 217 aa23.91■■□□□ 1.42
SSBP3-216ENST00000610401 ELF2Q15723 593 aa23.91■■□□□ 1.42
SSBP3-216ENST00000610401 NSUN7Q8NE18 718 aaKnown RBP23.91■■□□□ 1.42
SSBP3-216ENST00000610401 ZNF609O15014 1411 aa23.9■■□□□ 1.42
SSBP3-216ENST00000610401 NWD1Q149M9 1564 aa23.9■■□□□ 1.42
SSBP3-216ENST00000610401 PXDNLA1KZ92 1463 aa23.9■■□□□ 1.42
SSBP3-216ENST00000610401 MARCKSP29966 332 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-216ENST00000610401 TTC5Q8N0Z6 440 aa23.9■■□□□ 1.42
SSBP3-216ENST00000610401 ZBTB3Q9H5J0 574 aa23.9■■□□□ 1.42
SSBP3-216ENST00000610401 ERICH4A6NGS2 130 aa23.89■■□□□ 1.42
SSBP3-216ENST00000610401 DIP2AQ14689 1571 aa23.89■■□□□ 1.42
SSBP3-216ENST00000610401 IQCB1Q15051 598 aa23.89■■□□□ 1.42
SSBP3-216ENST00000610401 MED23Q9ULK4 1368 aa23.89■■□□□ 1.41
SSBP3-216ENST00000610401 SMTNL1A8MU46 457 aa23.89■■□□□ 1.41
SSBP3-216ENST00000610401 AMOTQ4VCS5 1084 aa23.89■■□□□ 1.41
SSBP3-216ENST00000610401 HDAC5Q9UQL6 1122 aa23.89■■□□□ 1.41
SSBP3-216ENST00000610401 LRRC24Q50LG9 513 aa23.88■■□□□ 1.41
SSBP3-216ENST00000610401 TMC6Q7Z403 805 aa23.88■■□□□ 1.41
SSBP3-216ENST00000610401 ANKRD7Q92527 254 aa23.88■■□□□ 1.41
SSBP3-216ENST00000610401 HMG20BQ9P0W2 317 aa23.88■■□□□ 1.41
SSBP3-216ENST00000610401 LMOD1P29536 600 aaPredicted RBP23.88■■□□□ 1.41
SSBP3-216ENST00000610401 DPCR1Q3MIW9 517 aa23.88■■□□□ 1.41
SSBP3-216ENST00000610401 CLIC4Q9Y696 253 aa23.88■■□□□ 1.41
SSBP3-216ENST00000610401 STX1AQ16623 288 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 NDUFA8P51970 172 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 KRT32Q14532 448 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 STK38Q15208 465 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 PI16Q6UXB8 463 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 LRRN4CLQ8ND94 238 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 IFNKQ9P0W0 207 aa23.87■■□□□ 1.41
SSBP3-216ENST00000610401 U3KPZ7 1027 aaPredicted RBP23.87■■□□□ 1.41
SSBP3-216ENST00000610401 PUS3Q9BZE2 481 aaKnown RBP23.86■■□□□ 1.41
SSBP3-216ENST00000610401 AGLP35573 1532 aa23.86■■□□□ 1.41
SSBP3-216ENST00000610401 ATP5JP18859 108 aa23.86■■□□□ 1.41
SSBP3-216ENST00000610401 DHX32Q7L7V1 743 aaKnown RBP23.86■■□□□ 1.41
SSBP3-216ENST00000610401 METTL22Q9BUU2 404 aaPredicted RBP23.86■■□□□ 1.41
SSBP3-216ENST00000610401 PCDHA7Q9UN72 937 aa23.86■■□□□ 1.41
SSBP3-216ENST00000610401 CTIFO43310 598 aaKnown RBP23.85■■□□□ 1.41
SSBP3-216ENST00000610401 ADD1P35611 737 aaKnown RBP23.85■■□□□ 1.41
SSBP3-216ENST00000610401 AIFM3Q96NN9 605 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 E7EWF7 191 aa23.85■■□□□ 1.41
SSBP3-216ENST00000610401 SNW1Q13573 536 aaKnown RBP23.85■■□□□ 1.41
SSBP3-216ENST00000610401 DHX40Q8IX18 779 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms