RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
LINC01278-204ENST00000609143 CUL4AQ13619 759 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 CLEC4GQ6UXB4 293 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
LINC01278-204ENST00000609143 AFF2P51816 1311 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 ABCC12Q96J65 1359 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 FAM177BA6PVY3 158 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
LINC01278-204ENST00000609143 MCMDC2Q4G0Z9 681 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 CREB3L3Q68CJ9 461 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
LINC01278-204ENST00000609143 LRP5O75197 1615 aa13.74□□□□□ -0.21
LINC01278-204ENST00000609143 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
LINC01278-204ENST00000609143 LRRFIP1Q32MZ4 808 aaKnown RBP13.73□□□□□ -0.21
LINC01278-204ENST00000609143 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
LINC01278-204ENST00000609143 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
LINC01278-204ENST00000609143 INTS4Q96HW7 963 aaKnown RBP13.73□□□□□ -0.21
LINC01278-204ENST00000609143 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
LINC01278-204ENST00000609143 LAMB2P55268 1798 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 RGL2O15211 777 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 TAF5LO75529 589 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 NTSR2O95665 410 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 ADORA1P30542 326 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 TTC14Q96N46 770 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 HMG20BQ9P0W2 317 aa13.73□□□□□ -0.21
LINC01278-204ENST00000609143 SLC27A2O14975 620 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
LINC01278-204ENST00000609143 HELLSQ9NRZ9 838 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 MROH5Q6ZUA9 1318 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 DDX60Q8IY21 1712 aaKnown RBP13.72□□□□□ -0.21
LINC01278-204ENST00000609143 PSMA5P28066 241 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 SSFA2P28290 1259 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 GSE1Q14687 1217 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 CCDC152Q4G0S7 254 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 PTF1AQ7RTS3 328 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 TRPC5Q9UL62 973 aaPredicted RBP13.72□□□□□ -0.21
LINC01278-204ENST00000609143 ATRNO75882 1429 aa13.72□□□□□ -0.21
LINC01278-204ENST00000609143 PDE8BO95263 885 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 RTL9Q8NET4 1388 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 PTMSP20962 102 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 AK2P54819 239 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC01278-204ENST00000609143 VPS53Q5VIR6 699 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 VGLL2Q8N8G2 317 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
LINC01278-204ENST00000609143 SCN7AQ01118 1682 aa13.71□□□□□ -0.21
LINC01278-204ENST00000609143 KCNQ4P56696 695 aa13.71□□□□□ -0.22
LINC01278-204ENST00000609143 ADCK5Q3MIX3 580 aa13.71□□□□□ -0.22
LINC01278-204ENST00000609143 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.22
LINC01278-204ENST00000609143 MPHOSPH8Q99549 860 aa13.71□□□□□ -0.22
LINC01278-204ENST00000609143 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.22
LINC01278-204ENST00000609143 CCNL1Q9UK58 526 aaPredicted RBP13.71□□□□□ -0.22
LINC01278-204ENST00000609143 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.22
LINC01278-204ENST00000609143 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
LINC01278-204ENST00000609143 RNF113AO15541 343 aaKnown RBP13.7□□□□□ -0.22
LINC01278-204ENST00000609143 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
LINC01278-204ENST00000609143 RUFY3Q7L099 469 aa13.7□□□□□ -0.22
LINC01278-204ENST00000609143 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
LINC01278-204ENST00000609143 RPS6KA4O75676 772 aa13.7□□□□□ -0.22
LINC01278-204ENST00000609143 CYP2E1P05181 493 aaPredicted RBP13.7□□□□□ -0.22
LINC01278-204ENST00000609143 KRT32Q14532 448 aa13.7□□□□□ -0.22
LINC01278-204ENST00000609143 PUM3Q15397 648 aaKnown RBP13.7□□□□□ -0.22
LINC01278-204ENST00000609143 FAM182BQ5T319 152 aa13.7□□□□□ -0.22
LINC01278-204ENST00000609143 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
LINC01278-204ENST00000609143 SEC62Q99442 399 aaKnown RBP13.7□□□□□ -0.22
LINC01278-204ENST00000609143 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
LINC01278-204ENST00000609143 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
LINC01278-204ENST00000609143 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
LINC01278-204ENST00000609143 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
LINC01278-204ENST00000609143 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
LINC01278-204ENST00000609143 CHGBP05060 677 aa13.69□□□□□ -0.22
LINC01278-204ENST00000609143 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
LINC01278-204ENST00000609143 LPIN2Q92539 896 aa13.69□□□□□ -0.22
LINC01278-204ENST00000609143 GNPATO15228 680 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 CPA1P15085 419 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 SEPT12Q8IYM1 358 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 ZSCAN31Q96LW9 406 aaPredicted RBP13.68□□□□□ -0.22
LINC01278-204ENST00000609143 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 LY75O60449 1722 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 ARAP2Q8WZ64 1704 aa13.68□□□□□ -0.22
LINC01278-204ENST00000609143 UQCRFS1P1P0C7P4 283 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 SLC5A1P13866 664 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 ZAP70P43403 619 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 SCARF1Q14162 830 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 SEC31BQ9NQW1 1179 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 RTCBQ9Y3I0 505 aaKnown RBP13.67□□□□□ -0.22
LINC01278-204ENST00000609143 TRAK2O60296 914 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 ZPR1O75312 459 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 CDC5LQ99459 802 aaKnown RBP13.67□□□□□ -0.22
LINC01278-204ENST00000609143 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
LINC01278-204ENST00000609143 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
LINC01278-204ENST00000609143 MAST3O60307 1309 aa13.67□□□□□ -0.22
LINC01278-204ENST00000609143 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
LINC01278-204ENST00000609143 FGFR2P21802 821 aa13.66□□□□□ -0.22
LINC01278-204ENST00000609143 PKP1Q13835 747 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms