RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 PRKAR2BP31323 418 aa12.4□□□□□ -0.42
CTCFL-220ENST00000608858 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-220ENST00000608858 SLC10A5Q5PT55 438 aa12.4□□□□□ -0.42
CTCFL-220ENST00000608858 INTS3Q68E01 1043 aaKnown RBP12.4□□□□□ -0.42
CTCFL-220ENST00000608858 POLLQ9UGP5 575 aa12.4□□□□□ -0.42
CTCFL-220ENST00000608858 KIAA0100Q14667 2235 aaKnown RBP12.39□□□□□ -0.43
CTCFL-220ENST00000608858 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
CTCFL-220ENST00000608858 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
CTCFL-220ENST00000608858 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
CTCFL-220ENST00000608858 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
CTCFL-220ENST00000608858 CENPFP49454 3210 aa12.39□□□□□ -0.43
CTCFL-220ENST00000608858 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
CTCFL-220ENST00000608858 G3V3G9 751 aa12.38□□□□□ -0.43
CTCFL-220ENST00000608858 GPSM2P81274 684 aa12.38□□□□□ -0.43
CTCFL-220ENST00000608858 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-220ENST00000608858 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
CTCFL-220ENST00000608858 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
CTCFL-220ENST00000608858 FZD1Q9UP38 647 aa12.38□□□□□ -0.43
CTCFL-220ENST00000608858 VIL1P09327 827 aaKnown RBP12.37□□□□□ -0.43
CTCFL-220ENST00000608858 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
CTCFL-220ENST00000608858 PTPN12Q05209 780 aaKnown RBP12.37□□□□□ -0.43
CTCFL-220ENST00000608858 GRAPQ13588 217 aa12.37□□□□□ -0.43
CTCFL-220ENST00000608858 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-220ENST00000608858 CD99L2Q8TCZ2 262 aa12.37□□□□□ -0.43
CTCFL-220ENST00000608858 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
CTCFL-220ENST00000608858 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
CTCFL-220ENST00000608858 PTPN22Q9Y2R2 807 aa12.37□□□□□ -0.43
CTCFL-220ENST00000608858 CEP290O15078 2479 aa12.37□□□□□ -0.43
CTCFL-220ENST00000608858 ANXA1P04083 346 aa12.36□□□□□ -0.43
CTCFL-220ENST00000608858 FKBP1BP68106 108 aa12.36□□□□□ -0.43
CTCFL-220ENST00000608858 WTIPA6NIX2 430 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-220ENST00000608858 CAP1Q01518 475 aa12.35□□□□□ -0.43
CTCFL-220ENST00000608858 SREBF2Q12772 1141 aa12.35□□□□□ -0.43
CTCFL-220ENST00000608858 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
CTCFL-220ENST00000608858 PARP10Q53GL7 1025 aa12.35□□□□□ -0.43
CTCFL-220ENST00000608858 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
CTCFL-220ENST00000608858 DPF3Q92784 378 aa12.35□□□□□ -0.43
CTCFL-220ENST00000608858 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
CTCFL-220ENST00000608858 TRMT112Q9UI30 125 aaKnown RBP12.35□□□□□ -0.43
CTCFL-220ENST00000608858 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
CTCFL-220ENST00000608858 AIMP1Q12904 312 aaKnown RBP12.34□□□□□ -0.43
CTCFL-220ENST00000608858 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
CTCFL-220ENST00000608858 NBPF9Q3BBW0 867 aa12.34□□□□□ -0.43
CTCFL-220ENST00000608858 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
CTCFL-220ENST00000608858 MYOZ2Q9NPC6 264 aa12.34□□□□□ -0.43
CTCFL-220ENST00000608858 BRCA2P51587 3418 aa12.34□□□□□ -0.43
CTCFL-220ENST00000608858 EIF4G2P78344 907 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTCFL-220ENST00000608858 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
CTCFL-220ENST00000608858 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
CTCFL-220ENST00000608858 RSPH6AQ9H0K4 717 aa12.33□□□□□ -0.44
CTCFL-220ENST00000608858 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
CTCFL-220ENST00000608858 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 ZNF280AP59817 542 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-220ENST00000608858 SPRYD7Q5W111 196 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 RSBN1LQ6PCB5 846 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-220ENST00000608858 NLRP10Q86W26 655 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 IFNL1Q8IU54 200 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 NECTIN2Q92692 538 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 SLC10A4Q96EP9 437 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 EYA3Q99504 573 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 MXD3Q9BW11 206 aa12.32□□□□□ -0.44
CTCFL-220ENST00000608858 ANGEL1Q9UNK9 670 aaKnown RBP12.32□□□□□ -0.44
CTCFL-220ENST00000608858 IBTKQ9P2D0 1353 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-220ENST00000608858 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-220ENST00000608858 U2AF1L5P0DN76 240 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-220ENST00000608858 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
CTCFL-220ENST00000608858 U2AF1Q01081 240 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTCFL-220ENST00000608858 PROSER3Q2NL68 480 aa12.31□□□□□ -0.44
CTCFL-220ENST00000608858 ARMC5Q96C12 935 aa12.31□□□□□ -0.44
CTCFL-220ENST00000608858 HTTP42858 3142 aa12.31□□□□□ -0.44
CTCFL-220ENST00000608858 COL6A3P12111 3177 aa12.31□□□□□ -0.44
CTCFL-220ENST00000608858 DUOX1Q9NRD9 1551 aa12.3□□□□□ -0.44
CTCFL-220ENST00000608858 IGF2BP3O00425 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTCFL-220ENST00000608858 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
CTCFL-220ENST00000608858 NF2P35240 595 aa12.3□□□□□ -0.44
CTCFL-220ENST00000608858 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
CTCFL-220ENST00000608858 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
CTCFL-220ENST00000608858 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
CTCFL-220ENST00000608858 CUL9Q8IWT3 2517 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 LAMB2P55268 1798 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 CRHR2Q13324 411 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 COPS6Q7L5N1 327 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 AGBL3Q8NEM8 1001 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
CTCFL-220ENST00000608858 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 FAM89AQ96GI7 184 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 ZNF333Q96JL9 665 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 CLMNQ96JQ2 1002 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 ANKIB1Q9P2G1 1089 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 SH3TC1Q8TE82 1336 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 SCN9AQ15858 1988 aa12.29□□□□□ -0.44
CTCFL-220ENST00000608858 PER1O15534 1290 aaPredicted RBP12.28□□□□□ -0.44
CTCFL-220ENST00000608858 UFL1O94874 794 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 SP3Q02447 781 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 PDIA6Q15084 440 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 SLC9C1Q4G0N8 1177 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
CTCFL-220ENST00000608858 GMLQ99445 158 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms