RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 OPLAHO14841 1288 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 XYLBO75191 536 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 WISP1O95388 367 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 SOX18P35713 384 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 RNF43Q68DV7 783 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 CACTIN-AS1Q8N1I8 211 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.02
CTSS-206ENST00000607427 USP20Q9Y2K6 914 aa8.65□□□□□ -1.02
CTSS-206ENST00000607427 MMP20O60882 483 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 LGR5O75473 907 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 WNT11O96014 354 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 TRIM42Q8IWZ5 723 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 GALNT11Q8NCW6 608 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 FAM46AQ96IP4 442 aaKnown RBP8.64□□□□□ -1.03
CTSS-206ENST00000607427 ADGRE2Q9UHX3 823 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 PPME1Q9Y570 386 aa8.64□□□□□ -1.03
CTSS-206ENST00000607427 C11orf91Q3C1V1 193 aa8.63□□□□□ -1.03
CTSS-206ENST00000607427 ACAD11Q709F0 780 aa8.63□□□□□ -1.03
CTSS-206ENST00000607427 MYO19Q96H55 970 aa8.63□□□□□ -1.03
CTSS-206ENST00000607427 HMX2A2RU54 273 aa8.62□□□□□ -1.03
CTSS-206ENST00000607427 KRTAP4-9Q9BYQ8 210 aa8.62□□□□□ -1.03
CTSS-206ENST00000607427 CD68P34810 354 aaPredicted RBP8.61□□□□□ -1.03
CTSS-206ENST00000607427 LARP1Q6PKG0 1096 aaKnown RBP8.61□□□□□ -1.03
CTSS-206ENST00000607427 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
CTSS-206ENST00000607427 MYRFLQ96LU7 910 aa8.61□□□□□ -1.03
CTSS-206ENST00000607427 TM4SF5O14894 197 aa8.6□□□□□ -1.03
CTSS-206ENST00000607427 JAG1P78504 1218 aa8.6□□□□□ -1.03
CTSS-206ENST00000607427 DPYDQ12882 1025 aa8.6□□□□□ -1.03
CTSS-206ENST00000607427 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
CTSS-206ENST00000607427 CRTC2Q53ET0 693 aaPredicted RBP8.6□□□□□ -1.03
CTSS-206ENST00000607427 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
CTSS-206ENST00000607427 KCNK4Q9NYG8 393 aa8.6□□□□□ -1.03
CTSS-206ENST00000607427 MAFBQ9Y5Q3 323 aaPredicted RBP8.6□□□□□ -1.03
CTSS-206ENST00000607427 KCNMB2Q9Y691 235 aa8.6□□□□□ -1.03
CTSS-206ENST00000607427 LINC01387J3KSC0 135 aa8.59□□□□□ -1.03
CTSS-206ENST00000607427 FOXO3O43524 673 aa8.59□□□□□ -1.03
CTSS-206ENST00000607427 PTK7Q13308 1070 aa8.59□□□□□ -1.03
CTSS-206ENST00000607427 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.03
CTSS-206ENST00000607427 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
CTSS-206ENST00000607427 PROSER2Q86WR7 435 aaPredicted RBP8.58□□□□□ -1.04
CTSS-206ENST00000607427 SHKBP1Q8TBC3 707 aa8.58□□□□□ -1.04
CTSS-206ENST00000607427 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
CTSS-206ENST00000607427 WEE1P30291 646 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 TXNDC11Q6PKC3 985 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 FAM20CQ8IXL6 584 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 GLMNQ92990 594 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 FAM83CQ9BQN1 747 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 TFIP11Q9UBB9 837 aaKnown RBP8.57□□□□□ -1.04
CTSS-206ENST00000607427 LRFN2Q9ULH4 789 aa8.57□□□□□ -1.04
CTSS-206ENST00000607427 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.55□□□□□ -1.04
CTSS-206ENST00000607427 NLRP13Q86W25 1043 aa8.55□□□□□ -1.04
CTSS-206ENST00000607427 ANKMY2Q8IV38 441 aa8.55□□□□□ -1.04
CTSS-206ENST00000607427 ABI1Q8IZP0 508 aa8.55□□□□□ -1.04
CTSS-206ENST00000607427 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L10C9JJH3 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L21D6R901 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 CDC27P30260 824 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 ATP11AP98196 1134 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 DUOXA2Q1HG44 320 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 OGFOD2Q6N063 350 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 CARD10Q9BWT7 1032 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 LACRTQ9GZZ8 138 aa8.54□□□□□ -1.04
CTSS-206ENST00000607427 FAM196BA6NMK8 535 aa8.53□□□□□ -1.04
CTSS-206ENST00000607427 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
CTSS-206ENST00000607427 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
CTSS-206ENST00000607427 BEND4Q6ZU67 534 aa8.53□□□□□ -1.04
CTSS-206ENST00000607427 KLHL23Q8NBE8 558 aa8.53□□□□□ -1.04
CTSS-206ENST00000607427 OR13H1Q8NG92 308 aa8.53□□□□□ -1.04
CTSS-206ENST00000607427 UBASH3BQ8TF42 649 aa8.53□□□□□ -1.04
CTSS-206ENST00000607427 FOXD4L4Q8WXT5 416 aaPredicted RBP8.53□□□□□ -1.04
CTSS-206ENST00000607427 A6NJR5 290 aa8.52□□□□□ -1.05
CTSS-206ENST00000607427 FSCN2O14926 492 aa8.52□□□□□ -1.05
CTSS-206ENST00000607427 BMP3P12645 472 aa8.52□□□□□ -1.05
CTSS-206ENST00000607427 HOXA10P31260 410 aaPredicted RBP8.52□□□□□ -1.05
CTSS-206ENST00000607427 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
CTSS-206ENST00000607427 CEP135Q66GS9 1140 aa8.52□□□□□ -1.05
CTSS-206ENST00000607427 KCNF1Q9H3M0 494 aa8.52□□□□□ -1.05
CTSS-206ENST00000607427 ADAM11O75078 769 aa8.51□□□□□ -1.05
CTSS-206ENST00000607427 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTSS-206ENST00000607427 CDC25BP30305 580 aa8.51□□□□□ -1.05
CTSS-206ENST00000607427 ANKRD34AQ69YU3 496 aa8.51□□□□□ -1.05
CTSS-206ENST00000607427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.05
CTSS-206ENST00000607427 PIM2Q9P1W9 311 aa8.51□□□□□ -1.05
CTSS-206ENST00000607427 WDR64B1ANS9 1081 aa8.5□□□□□ -1.05
CTSS-206ENST00000607427 PREPP48147 710 aa8.5□□□□□ -1.05
CTSS-206ENST00000607427 HYAL2Q12891 473 aa8.5□□□□□ -1.05
CTSS-206ENST00000607427 FAM117BQ6P1L5 589 aa8.5□□□□□ -1.05
CTSS-206ENST00000607427 ADAMTSL4Q6UY14 1074 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms