RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
PKNOX1-210ENST00000607049 DBNDD1Q9H9R9 158 aa18.24■□□□□ 0.51
PKNOX1-210ENST00000607049 PTPRCP08575 1304 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 COL4A5P29400 1685 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 ANKRD18BA2A2Z9 1011 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 ECE2O60344 883 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 ITGA6P23229 1130 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 EPS15P42566 896 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 GMPSP49915 693 aaPredicted RBP18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 KLRG1Q96E93 195 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 ANKRD2Q9GZV1 360 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 CHMP3Q9Y3E7 222 aa18.23■□□□□ 0.51
PKNOX1-210ENST00000607049 GRM8O00222 908 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 DOK7Q18PE1 504 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 CNTROBQ8N137 903 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 DNAJC5GQ8N7S2 189 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 CREBZFQ9NS37 354 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 LRRC37AA6NMS7 1700 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 CEP350Q5VT06 3117 aa18.22■□□□□ 0.51
PKNOX1-210ENST00000607049 CSF1RP07333 972 aa18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 RPS12P25398 132 aaKnown RBP18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 CASP7P55210 303 aa18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 HTRA3P83110 453 aa18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 ALDH1L2Q3SY69 923 aa18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 TAF7LQ5H9L4 462 aa18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 MINPP1Q9UNW1 487 aa18.21■□□□□ 0.51
PKNOX1-210ENST00000607049 TAF1P21675 1872 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 YDJCA8MPS7 323 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 KCNJ4P48050 445 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 FAM161AQ3B820 660 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 MAP1SQ66K74 1059 aaPredicted RBP18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 DPF2Q92785 391 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 CNOT7Q9UIV1 285 aaKnown RBP18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 LEMD3Q9Y2U8 911 aa18.2■□□□□ 0.5
PKNOX1-210ENST00000607049 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
PKNOX1-210ENST00000607049 PSMD14O00487 310 aa18.19■□□□□ 0.5
PKNOX1-210ENST00000607049 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
PKNOX1-210ENST00000607049 GPR101Q96P66 508 aaPredicted RBP18.19■□□□□ 0.5
PKNOX1-210ENST00000607049 DUOX1Q9NRD9 1551 aa18.19■□□□□ 0.5
PKNOX1-210ENST00000607049 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
PKNOX1-210ENST00000607049 ITGBL1O95965 494 aaPredicted RBP18.18■□□□□ 0.5
PKNOX1-210ENST00000607049 CCT4P50991 539 aaKnown RBP18.18■□□□□ 0.5
PKNOX1-210ENST00000607049 PODNQ7Z5L7 613 aa18.18■□□□□ 0.5
PKNOX1-210ENST00000607049 ZC3H15Q8WU90 426 aaKnown RBP18.18■□□□□ 0.5
PKNOX1-210ENST00000607049 SSH1Q8WYL5 1049 aa18.18■□□□□ 0.5
PKNOX1-210ENST00000607049 PASKQ96RG2 1323 aa18.18■□□□□ 0.5
PKNOX1-210ENST00000607049 LMBR1LQ6UX01 489 aa18.17■□□□□ 0.5
PKNOX1-210ENST00000607049 MICALL2Q8IY33 904 aa18.17■□□□□ 0.5
PKNOX1-210ENST00000607049 MED23Q9ULK4 1368 aa18.17■□□□□ 0.5
PKNOX1-210ENST00000607049 FOXO4P98177 505 aa18.16■□□□□ 0.5
PKNOX1-210ENST00000607049 TRMT2AQ8IZ69 625 aaKnown RBP18.16■□□□□ 0.5
PKNOX1-210ENST00000607049 ZBTB12Q9Y330 459 aaPredicted RBP18.16■□□□□ 0.5
PKNOX1-210ENST00000607049 VIL1P09327 827 aaKnown RBP18.15■□□□□ 0.5
PKNOX1-210ENST00000607049 COA1Q9GZY4 146 aa18.15■□□□□ 0.5
PKNOX1-210ENST00000607049 ZNF804BA4D1E1 1349 aa18.15■□□□□ 0.5
PKNOX1-210ENST00000607049 MYH3P11055 1940 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 USP17L3A6NCW0 530 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 USP17L4A6NCW7 530 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 USP17L1Q7RTZ2 530 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 AGBL3Q8NEM8 1001 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 CNNM1Q9NRU3 951 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.49
PKNOX1-210ENST00000607049 COL4A1P02462 1669 aa18.13■□□□□ 0.49
PKNOX1-210ENST00000607049 CHRNDQ07001 517 aa18.13■□□□□ 0.49
PKNOX1-210ENST00000607049 RSBN1LQ6PCB5 846 aaPredicted RBP18.13■□□□□ 0.49
PKNOX1-210ENST00000607049 MIER1Q8N108 512 aa18.13■□□□□ 0.49
PKNOX1-210ENST00000607049 ABT1Q9ULW3 272 aaKnown RBP18.13■□□□□ 0.49
PKNOX1-210ENST00000607049 CDC37L1Q7L3B6 337 aa18.12■□□□□ 0.49
PKNOX1-210ENST00000607049 FBXW7Q969H0 707 aa18.12■□□□□ 0.49
PKNOX1-210ENST00000607049 API5Q9BZZ5 524 aaKnown RBP18.12■□□□□ 0.49
PKNOX1-210ENST00000607049 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
PKNOX1-210ENST00000607049 MKRN1Q9UHC7 482 aaKnown RBP18.12■□□□□ 0.49
PKNOX1-210ENST00000607049 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
PKNOX1-210ENST00000607049 NBPF7P0C2Y1 421 aaPredicted RBP18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 TBC1D10BQ4KMP7 808 aaPredicted RBP18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 RBM26Q5T8P6 1007 aaKnown RBP18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 OGFOD1Q8N543 542 aa18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 DCPSQ96C86 337 aaKnown RBP18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 PGAP2Q9UHJ9 254 aa18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 UTYO14607 1347 aa18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 MYO3BQ8WXR4 1341 aa18.11■□□□□ 0.49
PKNOX1-210ENST00000607049 ADAMTSL1Q8N6G6 1762 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 USP17L8P0C7I0 530 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 MMP14P50281 582 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 EPHA10Q5JZY3 1008 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 TRPM4Q8TD43 1214 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
PKNOX1-210ENST00000607049 KIF16BQ96L93 1317 aa18.09■□□□□ 0.49
PKNOX1-210ENST00000607049 IPO8O15397 1037 aaKnown RBP18.09■□□□□ 0.49
PKNOX1-210ENST00000607049 KIF4BQ2VIQ3 1234 aa18.09■□□□□ 0.49
PKNOX1-210ENST00000607049 DEFB115Q30KQ5 88 aa18.09■□□□□ 0.49
PKNOX1-210ENST00000607049 STRIP1Q5VSL9 837 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms