RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 INTS4Q96HW7 963 aaKnown RBP18.99■□□□□ 0.63
CTSA-214ENST00000606788 ABCA3Q99758 1704 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 RNF20Q5VTR2 975 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 TNS2Q63HR2 1409 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 STX6O43752 255 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 ZAP70P43403 619 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 CCDC24Q8N4L8 307 aa18.99■□□□□ 0.63
CTSA-214ENST00000606788 RPAP1Q9BWH6 1393 aaPredicted RBP18.99■□□□□ 0.63
CTSA-214ENST00000606788 USP48Q86UV5 1035 aa18.98■□□□□ 0.63
CTSA-214ENST00000606788 MED23Q9ULK4 1368 aa18.98■□□□□ 0.63
CTSA-214ENST00000606788 UBN2Q6ZU65 1347 aa18.98■□□□□ 0.63
CTSA-214ENST00000606788 PCCAP05165 728 aaPredicted RBP18.98■□□□□ 0.63
CTSA-214ENST00000606788 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
CTSA-214ENST00000606788 TEX13AQ9BXU3 409 aaPredicted RBP18.98■□□□□ 0.63
CTSA-214ENST00000606788 MRE11P49959 708 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 SEC31BQ9NQW1 1179 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 ABCC6O95255 1503 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 BCL9O00512 1426 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 ROBO1Q9Y6N7 1651 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 M0R2C6 588 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 JAK2O60674 1132 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 CCDC158Q5M9N0 1113 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 STOX1Q6ZVD7 989 aa18.97■□□□□ 0.63
CTSA-214ENST00000606788 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.97■□□□□ 0.63
CTSA-214ENST00000606788 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
CTSA-214ENST00000606788 EP400Q96L91 3159 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 CRKLP46109 303 aaKnown RBP18.96■□□□□ 0.63
CTSA-214ENST00000606788 ITPK1Q13572 414 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 CLEC17AQ6ZS10 378 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 BRF1Q92994 677 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 IQSEC3Q9UPP2 1182 aaPredicted RBP18.96■□□□□ 0.63
CTSA-214ENST00000606788 RPS6KB1P23443 525 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 DNM1Q05193 864 aaKnown RBP18.96■□□□□ 0.63
CTSA-214ENST00000606788 TOB2Q14106 344 aaPredicted RBP18.96■□□□□ 0.63
CTSA-214ENST00000606788 Q6ZUG5 572 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 STK11IPQ8N1F8 1099 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 OSBP2Q969R2 916 aa18.96■□□□□ 0.63
CTSA-214ENST00000606788 KDM4AO75164 1064 aa18.95■□□□□ 0.62
CTSA-214ENST00000606788 PSMA5P28066 241 aa18.95■□□□□ 0.62
CTSA-214ENST00000606788 CCT2P78371 535 aaKnown RBP18.95■□□□□ 0.62
CTSA-214ENST00000606788 ATP2B3Q16720 1220 aa18.95■□□□□ 0.62
CTSA-214ENST00000606788 NEK1Q96PY6 1258 aa18.95■□□□□ 0.62
CTSA-214ENST00000606788 GPHNQ9NQX3 736 aaPredicted RBP18.95■□□□□ 0.62
CTSA-214ENST00000606788 ZSCAN22P10073 491 aaPredicted RBP18.95■□□□□ 0.62
CTSA-214ENST00000606788 TCHHQ07283 1943 aa18.95■□□□□ 0.62
CTSA-214ENST00000606788 CTSWP56202 376 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 SUSD4Q5VX71 490 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 NGLY1Q96IV0 654 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.94■□□□□ 0.62
CTSA-214ENST00000606788 LOC102724428A0A0B4J2F2 783 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 IDH1O75874 414 aaKnown RBP18.94■□□□□ 0.62
CTSA-214ENST00000606788 SIK1P57059 783 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 LARP1BQ659C4 914 aaKnown RBP18.94■□□□□ 0.62
CTSA-214ENST00000606788 VSIG10Q8N0Z9 540 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 MAST3O60307 1309 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 SPATA31A1Q5TZJ5 1347 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
CTSA-214ENST00000606788 CDC37L1Q7L3B6 337 aa18.93■□□□□ 0.62
CTSA-214ENST00000606788 LAMB4A4D0S4 1761 aa18.93■□□□□ 0.62
CTSA-214ENST00000606788 WTIPA6NIX2 430 aaPredicted RBP18.93■□□□□ 0.62
CTSA-214ENST00000606788 NCOA5Q9HCD5 579 aaKnown RBP18.93■□□□□ 0.62
CTSA-214ENST00000606788 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
CTSA-214ENST00000606788 HSPD1P10809 573 aaKnown RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 APOBRQ0VD83 1088 aa18.92■□□□□ 0.62
CTSA-214ENST00000606788 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 TFIP11Q9UBB9 837 aaKnown RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 NIP7Q9Y221 180 aaKnown RBP eCLIP18.92■□□□□ 0.62
CTSA-214ENST00000606788 NASPP49321 788 aaPredicted RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 MPNDQ8N594 471 aa18.92■□□□□ 0.62
CTSA-214ENST00000606788 RBSNQ9H1K0 784 aa18.92■□□□□ 0.62
CTSA-214ENST00000606788 RNF113AO15541 343 aaKnown RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 EPB41L2O43491 1005 aaKnown RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 F13A1P00488 732 aa18.92■□□□□ 0.62
CTSA-214ENST00000606788 PHKA1P46020 1223 aa18.92■□□□□ 0.62
CTSA-214ENST00000606788 INTS5Q6P9B9 1019 aaKnown RBP18.92■□□□□ 0.62
CTSA-214ENST00000606788 TM6SF1Q9BZW5 370 aa18.92■□□□□ 0.62
CTSA-214ENST00000606788 UBAP1LF5GYI3 381 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 PTMSP20962 102 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 MCAMP43121 646 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 MTMR6Q9Y217 621 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 CEBPZQ03701 1054 aaKnown RBP18.91■□□□□ 0.62
CTSA-214ENST00000606788 IL17RAQ96F46 866 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 RRAGDQ9NQL2 400 aaPredicted RBP18.91■□□□□ 0.62
CTSA-214ENST00000606788 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 UBR2Q8IWV8 1755 aa18.91■□□□□ 0.62
CTSA-214ENST00000606788 APPP05067 770 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 GUCY1B3Q02153 619 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 DENND2AQ9ULE3 1009 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 DISP2A7MBM2 1401 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 CSF1RP07333 972 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 RIPOR2Q9Y4F9 1068 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
CTSA-214ENST00000606788 ITGB4P16144 1822 aa18.9■□□□□ 0.62
CTSA-214ENST00000606788 ZMYM1Q5SVZ6 1142 aa18.89■□□□□ 0.62
CTSA-214ENST00000606788 KCNB2Q92953 911 aa18.89■□□□□ 0.62
CTSA-214ENST00000606788 TJP1Q07157 1748 aa18.89■□□□□ 0.62
CTSA-214ENST00000606788 CIAO1O76071 339 aa18.89■□□□□ 0.61
CTSA-214ENST00000606788 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms