RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 SLFNL1Q499Z3 407 aa18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 KMT5BQ4FZB7 885 aa18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 STARD3NLO95772 234 aa18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 ZNF215Q9UL58 517 aaPredicted RBP18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
PPFIA3-206ENST00000602655 SNAP23O00161 211 aa18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 MYCNP04198 464 aaPredicted RBP18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 GORABQ5T7V8 394 aa18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 KIF6Q6ZMV9 814 aa18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 BABAM1Q9NWV8 329 aa18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 USP21Q9UK80 565 aa18.06■□□□□ 0.48
PPFIA3-206ENST00000602655 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
PPFIA3-206ENST00000602655 MARCH10Q8NA82 808 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-206ENST00000602655 KIF1BPQ96EK5 621 aa18.05■□□□□ 0.48
PPFIA3-206ENST00000602655 PUS3Q9BZE2 481 aaKnown RBP18.05■□□□□ 0.48
PPFIA3-206ENST00000602655 COL5A2P05997 1499 aaPredicted RBP18.05■□□□□ 0.48
PPFIA3-206ENST00000602655 TFCP2Q12800 502 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 KRBA2Q6ZNG9 492 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 TRMT112Q9UI30 125 aaKnown RBP18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 DCCP43146 1447 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 REC8O95072 547 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 GYS2P54840 703 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 SLC4A9Q96Q91 983 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 PAXBP1Q9Y5B6 917 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 HOXB7P09629 217 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 HSPA1LP34931 641 aa18.04■□□□□ 0.48
PPFIA3-206ENST00000602655 HSP90AB3PQ58FF7 597 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 ERVV-2B6SEH9 535 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 TRIM66O15016 1216 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 CPA1P15085 419 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 FBXO38Q6PIJ6 1188 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 SSH3Q8TE77 659 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 STRCQ7RTU9 1775 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 TULP2O00295 520 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 IL25Q9H293 177 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 CWC25Q9NXE8 425 aaPredicted RBP18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
PPFIA3-206ENST00000602655 CAMK4Q16566 473 aa18.02■□□□□ 0.48
PPFIA3-206ENST00000602655 LRRC24Q50LG9 513 aa18.02■□□□□ 0.48
PPFIA3-206ENST00000602655 HEG1Q9ULI3 1381 aa18.02■□□□□ 0.47
PPFIA3-206ENST00000602655 PPFIA3O75145 1194 aa18.02■□□□□ 0.47
PPFIA3-206ENST00000602655 BMS1Q14692 1282 aaKnown RBP18.02■□□□□ 0.47
PPFIA3-206ENST00000602655 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.47
PPFIA3-206ENST00000602655 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 DZIP3Q86Y13 1208 aaKnown RBP18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 CPDO75976 1380 aa18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 BRD1O95696 1058 aa18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 SYT10Q6XYQ8 523 aa18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 FSD1Q9BTV5 496 aa18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 IQSEC3Q9UPP2 1182 aaPredicted RBP18.01■□□□□ 0.47
PPFIA3-206ENST00000602655 PTPN14Q15678 1187 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 PLBD2Q8NHP8 589 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 ALDH1L1O75891 902 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 SASH1O94885 1247 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 GOLGA6L1Q8N7Z2 621 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 DRC1Q96MC2 740 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 PATL2C9JE40 543 aaKnown RBP18■□□□□ 0.47
PPFIA3-206ENST00000602655 GPS2Q13227 327 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 STK11IPQ8N1F8 1099 aa18■□□□□ 0.47
PPFIA3-206ENST00000602655 DBNDD2Q9BQY9 259 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 SLIT3O75094 1523 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 AP5Z1O43299 807 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 CCDC192P0DO97 292 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 CCDC57Q2TAC2 916 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 LUZP1Q86V48 1076 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 EFCC1Q9HA90 598 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 RGPD1P0DJD0 1748 aa17.99■□□□□ 0.47
PPFIA3-206ENST00000602655 EP400NLQ6ZTU2 488 aa17.98■□□□□ 0.47
PPFIA3-206ENST00000602655 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
PPFIA3-206ENST00000602655 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 MCCP23508 829 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 CYP2C19P33261 490 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 CKAP2LQ8IYA6 745 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 ERC2O15083 957 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 FAM227BQ96M60 508 aa17.97■□□□□ 0.47
PPFIA3-206ENST00000602655 LOC102724428A0A0B4J2F2 783 aa17.96■□□□□ 0.47
PPFIA3-206ENST00000602655 SIK1P57059 783 aa17.96■□□□□ 0.47
PPFIA3-206ENST00000602655 CNNM1Q9NRU3 951 aa17.96■□□□□ 0.47
PPFIA3-206ENST00000602655 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
PPFIA3-206ENST00000602655 FILIP1Q7Z7B0 1213 aa17.96■□□□□ 0.47
PPFIA3-206ENST00000602655 PRR29P0C7W0 189 aa17.96■□□□□ 0.47
PPFIA3-206ENST00000602655 CLGNO14967 610 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 CCDC129Q6ZRS4 1044 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 CWC15Q9P013 229 aaKnown RBP17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 WWC3Q9ULE0 1092 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 SYCP1Q15431 976 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 SKIDA1Q1XH10 827 aa17.95■□□□□ 0.46
PPFIA3-206ENST00000602655 ERCC6LQ2NKX8 1250 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms