RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
FARP1-235ENST00000601656 ATP2B4P23634 1241 aa12.5□□□□□ -0.41
FARP1-235ENST00000601656 CRTC2Q53ET0 693 aaPredicted RBP12.5□□□□□ -0.41
FARP1-235ENST00000601656 TATDN2Q93075 761 aa12.5□□□□□ -0.41
FARP1-235ENST00000601656 SLC4A5Q9BY07 1137 aa12.5□□□□□ -0.41
FARP1-235ENST00000601656 ITGB4P16144 1822 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 C3orf80F5H4A9 247 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 SKIP12755 728 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 PTK7Q13308 1070 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 HLA-CQ95604 372 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
FARP1-235ENST00000601656 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 FOXN1O15353 648 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 VEGFAP15692 232 aaPredicted RBP12.48□□□□□ -0.41
FARP1-235ENST00000601656 KCNA3P22001 575 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 AMPHP49418 695 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 NLGN1Q8N2Q7 840 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 C1orf216Q8TAB5 229 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 PRDM10Q9NQV6 1147 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 PIM2Q9P1W9 311 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
FARP1-235ENST00000601656 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
FARP1-235ENST00000601656 HOXC9P31274 260 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 TMF1P82094 1093 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 NAALADL2Q58DX5 795 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 DALRD3Q5D0E6 543 aaKnown RBP12.47□□□□□ -0.41
FARP1-235ENST00000601656 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 FBXO33Q7Z6M2 555 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
FARP1-235ENST00000601656 VPS9D1Q9Y2B5 631 aa12.47□□□□□ -0.41
FARP1-235ENST00000601656 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 COL9A1P20849 921 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 FBLN1P23142 703 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 SIK1P57059 783 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 SWI5Q1ZZU3 235 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 HDGFL2Q7Z4V5 671 aaPredicted RBP12.46□□□□□ -0.41
FARP1-235ENST00000601656 PIGBQ92521 554 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 DCAF5Q96JK2 942 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
FARP1-235ENST00000601656 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
FARP1-235ENST00000601656 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
FARP1-235ENST00000601656 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
FARP1-235ENST00000601656 RECKO95980 971 aa12.45□□□□□ -0.42
FARP1-235ENST00000601656 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
FARP1-235ENST00000601656 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
FARP1-235ENST00000601656 MAP2P11137 1827 aaKnown RBP12.45□□□□□ -0.42
FARP1-235ENST00000601656 ATP5J2-PTCD1G3V325 749 aa12.44□□□□□ -0.42
FARP1-235ENST00000601656 RASA1P20936 1047 aa12.44□□□□□ -0.42
FARP1-235ENST00000601656 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
FARP1-235ENST00000601656 CTCFP49711 727 aaPredicted RBP12.44□□□□□ -0.42
FARP1-235ENST00000601656 ITPK1Q13572 414 aa12.44□□□□□ -0.42
FARP1-235ENST00000601656 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
FARP1-235ENST00000601656 CD163L1Q9NR16 1453 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 GLTPD2A6NH11 291 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 ZBBXA8MT70 800 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 CYP27B1O15528 508 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 FBXO45P0C2W1 286 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 NCLP19338 710 aaKnown RBP12.43□□□□□ -0.42
FARP1-235ENST00000601656 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
FARP1-235ENST00000601656 ANKMY2Q8IV38 441 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 AIDAQ96BJ3 306 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 ABHD8Q96I13 439 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
FARP1-235ENST00000601656 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
FARP1-235ENST00000601656 C4AP0C0L4 1744 aa12.42□□□□□ -0.42
FARP1-235ENST00000601656 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
FARP1-235ENST00000601656 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
FARP1-235ENST00000601656 DEPDC4Q8N2C3 294 aa12.42□□□□□ -0.42
FARP1-235ENST00000601656 SIN3AQ96ST3 1273 aa12.42□□□□□ -0.42
FARP1-235ENST00000601656 EDC4Q6P2E9 1401 aaKnown RBP12.42□□□□□ -0.42
FARP1-235ENST00000601656 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
FARP1-235ENST00000601656 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
FARP1-235ENST00000601656 GYS1P13807 737 aa12.41□□□□□ -0.42
FARP1-235ENST00000601656 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
FARP1-235ENST00000601656 COG3Q96JB2 828 aa12.41□□□□□ -0.42
FARP1-235ENST00000601656 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
FARP1-235ENST00000601656 ZC3H4Q9UPT8 1303 aaKnown RBP12.4□□□□□ -0.42
FARP1-235ENST00000601656 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
FARP1-235ENST00000601656 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.42
FARP1-235ENST00000601656 RFC4P35249 363 aa12.4□□□□□ -0.42
FARP1-235ENST00000601656 LBX1P52954 281 aa12.4□□□□□ -0.42
FARP1-235ENST00000601656 RASSF7Q02833 373 aa12.4□□□□□ -0.42
FARP1-235ENST00000601656 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
FARP1-235ENST00000601656 ASAP1Q9ULH1 1129 aa12.4□□□□□ -0.42
FARP1-235ENST00000601656 POTECB2RU33 542 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 LMNB1P20700 586 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 CHRNA5P30532 468 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 COL19A1Q14993 1142 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 L3MBTL2Q969R5 705 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
FARP1-235ENST00000601656 CCDC85CA6NKD9 419 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms