RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 METTL22Q9BUU2 404 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-207ENST00000601372 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 PDE8AO60658 829 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
ZNF558-207ENST00000601372 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
ZNF558-207ENST00000601372 NAA16Q6N069 864 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-207ENST00000601372 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
ZNF558-207ENST00000601372 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
ZNF558-207ENST00000601372 RAB3GAP1Q15042 981 aa12.91□□□□□ -0.34
ZNF558-207ENST00000601372 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
ZNF558-207ENST00000601372 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
ZNF558-207ENST00000601372 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
ZNF558-207ENST00000601372 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
ZNF558-207ENST00000601372 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
ZNF558-207ENST00000601372 KCNQ3O43525 872 aa12.91□□□□□ -0.34
ZNF558-207ENST00000601372 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
ZNF558-207ENST00000601372 RTL1A6NKG5 1358 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 STX6O43752 255 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 KRT32Q14532 448 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 SERPINC1P01008 464 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.34
ZNF558-207ENST00000601372 USPL1Q5W0Q7 1092 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 NIM1KQ8IY84 436 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 PDE4BQ07343 736 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
ZNF558-207ENST00000601372 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
ZNF558-207ENST00000601372 TSPY2A6NKD2 308 aa12.9□□□□□ -0.35
ZNF558-207ENST00000601372 RAB11FIP4Q86YS3 637 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 CDKL5O76039 1030 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 USP48Q86UV5 1035 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 CEP89Q96ST8 783 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 RNF41Q9H4P4 317 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-207ENST00000601372 ERBB3P21860 1342 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
ZNF558-207ENST00000601372 TFCP2Q12800 502 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
ZNF558-207ENST00000601372 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 USP26Q9BXU7 913 aa12.89□□□□□ -0.35
ZNF558-207ENST00000601372 TXLNAP40222 546 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 ATP8B2P98198 1209 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 PPIP5K2O43314 1243 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 ADCY5O95622 1261 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 DTNBO60941 627 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 HAND2P61296 217 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 TNNI2P48788 182 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 MAGEB6P1A0A0J9YX57 407 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 VAT1LQ9HCJ6 419 aa12.88□□□□□ -0.35
ZNF558-207ENST00000601372 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 SOS1Q07889 1333 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-207ENST00000601372 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-207ENST00000601372 CUL5Q93034 780 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-207ENST00000601372 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 LAMC1P11047 1609 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
ZNF558-207ENST00000601372 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
ZNF558-207ENST00000601372 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 CCDC82Q8N4S0 544 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 MAGEB6Q8N7X4 407 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
ZNF558-207ENST00000601372 TAF5LO75529 589 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
ZNF558-207ENST00000601372 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
ZNF558-207ENST00000601372 SLC12A7Q9Y666 1083 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 USP19O94966 1318 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 KAT14Q9H8E8 782 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 USP16Q9Y5T5 823 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 HIBADHP31937 336 aaKnown RBP12.86□□□□□ -0.35
ZNF558-207ENST00000601372 EPS15P42566 896 aa12.86□□□□□ -0.35
ZNF558-207ENST00000601372 NOL7Q9UMY1 257 aaKnown RBP12.86□□□□□ -0.35
ZNF558-207ENST00000601372 CATIPQ7Z7H3 387 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
ZNF558-207ENST00000601372 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
ZNF558-207ENST00000601372 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 CPA1P15085 419 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 PLS1Q14651 629 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms