RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 KLHL34Q8N239 644 aa18.71■□□□□ 0.59
SYDE1-204ENST00000600440 PTPRMP28827 1452 aa18.71■□□□□ 0.59
SYDE1-204ENST00000600440 H3BQF6 201 aa18.71■□□□□ 0.59
SYDE1-204ENST00000600440 REXO1L1PQ8IX06 675 aa18.71■□□□□ 0.59
SYDE1-204ENST00000600440 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
SYDE1-204ENST00000600440 ATP7BP35670 1465 aa18.71■□□□□ 0.59
SYDE1-204ENST00000600440 PARD6BQ9BYG5 372 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
SYDE1-204ENST00000600440 SERPINC1P01008 464 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 CFAP100Q494V2 611 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 WWC2Q6AWC2 1192 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 Q6ZUG5 572 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 FBXO18Q8NFZ0 1043 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
SYDE1-204ENST00000600440 NDUFB9Q9Y6M9 179 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 LRRFIP1Q32MZ4 808 aaKnown RBP18.7■□□□□ 0.58
SYDE1-204ENST00000600440 ICE2Q659A1 982 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 TXNDC2Q86VQ3 553 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 GOLGA5Q8TBA6 731 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 SECISBP2LQ93073 1101 aaKnown RBP18.7■□□□□ 0.58
SYDE1-204ENST00000600440 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
SYDE1-204ENST00000600440 FAM160A1Q05DH4 1040 aa18.69■□□□□ 0.58
SYDE1-204ENST00000600440 ADCY9O60503 1353 aa18.69■□□□□ 0.58
SYDE1-204ENST00000600440 EFCAB8A8MWE9 144 aa18.69■□□□□ 0.58
SYDE1-204ENST00000600440 PPP2R3AQ06190 1150 aa18.69■□□□□ 0.58
SYDE1-204ENST00000600440 ZNF589Q86UQ0 364 aaPredicted RBP18.69■□□□□ 0.58
SYDE1-204ENST00000600440 NUDT16Q96DE0 195 aaKnown RBP18.69■□□□□ 0.58
SYDE1-204ENST00000600440 PDE11AQ9HCR9 933 aa18.69■□□□□ 0.58
SYDE1-204ENST00000600440 KARSQ15046 597 aaKnown RBP18.68■□□□□ 0.58
SYDE1-204ENST00000600440 TTC31Q49AM3 519 aaPredicted RBP18.68■□□□□ 0.58
SYDE1-204ENST00000600440 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 WDR24Q96S15 920 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 MAP3K19Q56UN5 1328 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 MAP4K1Q92918 833 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 NCOA5Q9HCD5 579 aaKnown RBP18.68■□□□□ 0.58
SYDE1-204ENST00000600440 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
SYDE1-204ENST00000600440 PARP3Q9Y6F1 533 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 CHGBP05060 677 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
SYDE1-204ENST00000600440 IMPACTQ9P2X3 320 aa18.68■□□□□ 0.58
SYDE1-204ENST00000600440 CRB1P82279 1406 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 ASXL2Q76L83 1435 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 PI4KAP2A4QPH2 592 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 ACTN2P35609 894 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 PI4KAP1Q8N8J0 262 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 N4BP1O75113 896 aaKnown RBP18.67■□□□□ 0.58
SYDE1-204ENST00000600440 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
SYDE1-204ENST00000600440 LONRF2Q1L5Z9 754 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 NOM1Q5C9Z4 860 aaKnown RBP18.67■□□□□ 0.58
SYDE1-204ENST00000600440 SUGCTQ9HAC7 445 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 JRKLQ9Y4A0 524 aa18.67■□□□□ 0.58
SYDE1-204ENST00000600440 NDUFA8P51970 172 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 FANCCQ00597 558 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
SYDE1-204ENST00000600440 TRIM65Q6PJ69 517 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 CCDC129Q6ZRS4 1044 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 PACS2Q86VP3 889 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 DPF2Q92785 391 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 CCDC102AQ96A19 550 aa18.66■□□□□ 0.58
SYDE1-204ENST00000600440 AATKQ6ZMQ8 1374 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 DESI2Q9BSY9 194 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 ZSCAN16Q9H4T2 348 aaPredicted RBP18.65■□□□□ 0.58
SYDE1-204ENST00000600440 TLR7Q9NYK1 1049 aaKnown RBP18.65■□□□□ 0.58
SYDE1-204ENST00000600440 C9orf78Q9NZ63 289 aaPredicted RBP18.65■□□□□ 0.58
SYDE1-204ENST00000600440 UBASH3AP57075 661 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 POLA2Q14181 598 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 FUT8Q9BYC5 575 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 PHLPP2Q6ZVD8 1323 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 A0A1B0GUL7 405 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 SCRN1Q12765 414 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
SYDE1-204ENST00000600440 MRPS27Q92552 414 aaKnown RBP18.65■□□□□ 0.58
SYDE1-204ENST00000600440 TTC41PQ6P2S7 1318 aa18.64■□□□□ 0.58
SYDE1-204ENST00000600440 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.58
SYDE1-204ENST00000600440 STK38Q15208 465 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 HSP90AB4PQ58FF6 505 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 TTLL5Q6EMB2 1281 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 PCDHA7Q9UN72 937 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.64■□□□□ 0.57
SYDE1-204ENST00000600440 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 TMEM232C9JQI7 657 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 SLC3A2P08195 630 aaKnown RBP18.64■□□□□ 0.57
SYDE1-204ENST00000600440 TPM1P09493 284 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 CCDC12Q8WUD4 166 aaPredicted RBP18.64■□□□□ 0.57
SYDE1-204ENST00000600440 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 IRX2Q9BZI1 471 aaPredicted RBP18.64■□□□□ 0.57
SYDE1-204ENST00000600440 FAN1Q9Y2M0 1017 aa18.64■□□□□ 0.57
SYDE1-204ENST00000600440 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
SYDE1-204ENST00000600440 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 EXOC4Q96A65 974 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 DHX58Q96C10 678 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 SRRTQ9BXP5 876 aaKnown RBP18.63■□□□□ 0.57
SYDE1-204ENST00000600440 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 GPR161Q8N6U8 529 aaKnown RBP18.63■□□□□ 0.57
SYDE1-204ENST00000600440 KIAA1468Q9P260 1216 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 RCOR1Q9UKL0 485 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 PTPDC1A2A3K4 754 aa18.63■□□□□ 0.57
SYDE1-204ENST00000600440 RAPGEF3O95398 923 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms