RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, human

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP70-208	ENST00000599687	TATDN2	Q93075	761 aa		11.67	□□□□□ -0.54
SNRNP70-208	ENST00000599687	TFIP11	Q9UBB9	837 aa	Known RBP	11.67	□□□□□ -0.54
SNRNP70-208	ENST00000599687	SCN11A	Q9UI33	1791 aa		11.67	□□□□□ -0.54
SNRNP70-208	ENST00000599687	SRCAP	Q6ZRS2	3230 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	TMEM88B	A6NKF7	163 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	U2SURP	O15042	1029 aa	Known RBP	11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	MTHFSD	Q2M296	383 aa	Known RBP	11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	FLAD1	Q8NFF5	587 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	LRRN4	Q8WUT4	740 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	SLC4A9	Q96Q91	983 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	SYT17	Q9BSW7	474 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	VRTN	Q9H8Y1	702 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	LGR6	Q9HBX8	967 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	PCDHGC3	Q9UN70	934 aa		11.66	□□□□□ -0.54
SNRNP70-208	ENST00000599687	ZNF831	Q5JPB2	1677 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	HOXA2	O43364	376 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	FDX1	P10109	184 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	GUCA2A	Q02747	115 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	SMIM5	Q71RC9	77 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	AMIGO3	Q86WK7	504 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	CFAP53	Q96M91	514 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	UBR3	Q6ZT12	1888 aa		11.65	□□□□□ -0.54
SNRNP70-208	ENST00000599687	RNMT	O43148	476 aa	Known RBP	11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	POLD1	P28340	1107 aa		11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	SLC19A1	P41440	591 aa		11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	COPS2	P61201	443 aa		11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	PRR7	Q8TB68	274 aa		11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	HLA-C	Q95604	372 aa		11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	VIRMA	Q69YN4	1812 aa	Known RBP	11.64	□□□□□ -0.55
SNRNP70-208	ENST00000599687	ADAMTS7	Q9UKP4	1686 aa		11.63	□□□□□ -0.55
SNRNP70-208	ENST00000599687	ATG7	O95352	703 aa		11.63	□□□□□ -0.55
SNRNP70-208	ENST00000599687	EPS8L1	Q8TE68	723 aa		11.63	□□□□□ -0.55
SNRNP70-208	ENST00000599687	SLC52A2	Q9HAB3	445 aa		11.63	□□□□□ -0.55
SNRNP70-208	ENST00000599687	PTCD1	O75127	700 aa	Known RBP	11.62	□□□□□ -0.55
SNRNP70-208	ENST00000599687	SSFA2	P28290	1259 aa		11.62	□□□□□ -0.55
SNRNP70-208	ENST00000599687	SLF2	Q8IX21	1173 aa		11.62	□□□□□ -0.55
SNRNP70-208	ENST00000599687	NUDC	Q9Y266	331 aa		11.62	□□□□□ -0.55
SNRNP70-208	ENST00000599687	COL5A3	P25940	1745 aa	Predicted RBP	11.62	□□□□□ -0.55
SNRNP70-208	ENST00000599687	MAP3K5	Q99683	1374 aa		11.62	□□□□□ -0.55
SNRNP70-208	ENST00000599687	USP46	P62068	366 aa		11.61	□□□□□ -0.55
SNRNP70-208	ENST00000599687	RC3H1	Q5TC82	1133 aa	Known RBP	11.61	□□□□□ -0.55
SNRNP70-208	ENST00000599687	MSL1	Q68DK7	614 aa		11.61	□□□□□ -0.55
SNRNP70-208	ENST00000599687	TSC1	Q92574	1164 aa		11.61	□□□□□ -0.55
SNRNP70-208	ENST00000599687	PHACTR3	Q96KR7	559 aa		11.61	□□□□□ -0.55
SNRNP70-208	ENST00000599687	PRR14	Q9BWN1	585 aa		11.61	□□□□□ -0.55
SNRNP70-208	ENST00000599687	MRC1	P22897	1456 aa		11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	PRKAR2B	P31323	418 aa		11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	GCGR	P47871	477 aa		11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	IL17RE	Q8NFR9	667 aa		11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	GAS2L2	Q8NHY3	880 aa		11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	CNTNAP4	Q9C0A0	1308 aa		11.6	□□□□□ -0.55
SNRNP70-208	ENST00000599687	GNAT3	A8MTJ3	354 aa		11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	ZPR1	O75312	459 aa		11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	RPS6KA4	O75676	772 aa		11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	DDX10	Q13206	875 aa	Known RBP	11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	SLC39A6	Q13433	755 aa		11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	TRAPPC3L	Q5T215	181 aa		11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	RTCB	Q9Y3I0	505 aa	Known RBP	11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	CIC	Q96RK0	1608 aa	Predicted RBP	11.59	□□□□□ -0.55
SNRNP70-208	ENST00000599687	TJP1	Q07157	1748 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	MYH14	Q7Z406	1995 aa	Known RBP	11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	CFAP99	D6REC4	459 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	PRR20E	P86478	221 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	PRR20C	P86479	221 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	PRR20D	P86480	221 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	PRR20B	P86481	221 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	PRR20A	P86496	221 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	TREML4	Q6UXN2	200 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	TRIM67	Q6ZTA4	783 aa		11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	HELB	Q8NG08	1087 aa	Predicted RBP	11.58	□□□□□ -0.56
SNRNP70-208	ENST00000599687	CRKL	P46109	303 aa	Known RBP	11.57	□□□□□ -0.56
SNRNP70-208	ENST00000599687	MTMR2	Q13614	643 aa		11.57	□□□□□ -0.56
SNRNP70-208	ENST00000599687	TBC1D9	Q6ZT07	1266 aa		11.57	□□□□□ -0.56
SNRNP70-208	ENST00000599687	KCP	Q6ZWJ8	1503 aa		11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	TEF	Q10587	303 aa		11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	INTS5	Q6P9B9	1019 aa	Known RBP	11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	ZNF598	Q86UK7	904 aa	Known RBP	11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	DNAJC10	Q8IXB1	793 aa		11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	NLGN2	Q8NFZ4	835 aa		11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	SIPA1L3	O60292	1781 aa	Predicted RBP	11.56	□□□□□ -0.56
SNRNP70-208	ENST00000599687	CEMIP	Q8WUJ3	1361 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	UBR2	Q8IWV8	1755 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	FAM187A	A6NFU0	413 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	RFC4	P35249	363 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	SOX11	P35716	441 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	RALBP1	Q15311	655 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	CD2AP	Q9Y5K6	639 aa		11.55	□□□□□ -0.56
SNRNP70-208	ENST00000599687	POTEC	B2RU33	542 aa		11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	RNF223	E7ERA6	249 aa		11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	CYP19A1	P11511	503 aa	Predicted RBP	11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	SPRYD7	Q5W111	196 aa		11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	ZNF790	Q6PG37	636 aa		11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	NLGN1	Q8N2Q7	840 aa		11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	CCDC87	Q9NVE4	849 aa		11.54	□□□□□ -0.56
SNRNP70-208	ENST00000599687	GNE	Q9Y223	722 aa	Known RBP	11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms