RNA–Protein interactions for RNA: ENST00000598478.1

LINC00343-206, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-206ENST00000598478 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
LINC00343-206ENST00000598478 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
LINC00343-206ENST00000598478 C5P01031 1676 aa10.98□□□□□ -0.65
LINC00343-206ENST00000598478 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
LINC00343-206ENST00000598478 FSTL1Q12841 308 aa10.97□□□□□ -0.65
LINC00343-206ENST00000598478 AMIGO3Q86WK7 504 aa10.97□□□□□ -0.65
LINC00343-206ENST00000598478 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
LINC00343-206ENST00000598478 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
LINC00343-206ENST00000598478 USP54Q70EL1 1684 aa10.97□□□□□ -0.65
LINC00343-206ENST00000598478 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
LINC00343-206ENST00000598478 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
LINC00343-206ENST00000598478 LTN1O94822 1766 aa10.95□□□□□ -0.66
LINC00343-206ENST00000598478 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
LINC00343-206ENST00000598478 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
LINC00343-206ENST00000598478 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
LINC00343-206ENST00000598478 CCDC116Q8IYX3 515 aa10.95□□□□□ -0.66
LINC00343-206ENST00000598478 ANKRD24Q8TF21 1146 aa10.95□□□□□ -0.66
LINC00343-206ENST00000598478 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
LINC00343-206ENST00000598478 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
LINC00343-206ENST00000598478 TAF1LQ8IZX4 1826 aa10.94□□□□□ -0.66
LINC00343-206ENST00000598478 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
LINC00343-206ENST00000598478 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
LINC00343-206ENST00000598478 TOGARAM1Q9Y4F4 1720 aa10.94□□□□□ -0.66
LINC00343-206ENST00000598478 KIAA1551Q9HCM1 1747 aa10.93□□□□□ -0.66
LINC00343-206ENST00000598478 TSEN34Q9BSV6 310 aaKnown RBP10.93□□□□□ -0.66
LINC00343-206ENST00000598478 RRAGCQ9HB90 399 aa10.93□□□□□ -0.66
LINC00343-206ENST00000598478 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
LINC00343-206ENST00000598478 USP47Q96K76 1375 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 A0A0G2JLW4 131 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 FLAD1Q8NFF5 587 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 DNMT3LQ9UJW3 386 aa10.92□□□□□ -0.66
LINC00343-206ENST00000598478 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
LINC00343-206ENST00000598478 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
LINC00343-206ENST00000598478 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
LINC00343-206ENST00000598478 C4BP0C0L5 1744 aa10.91□□□□□ -0.66
LINC00343-206ENST00000598478 PKD1L3Q7Z443 1732 aa10.91□□□□□ -0.66
LINC00343-206ENST00000598478 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
LINC00343-206ENST00000598478 PDXDC2PQ6P474 469 aa10.9□□□□□ -0.66
LINC00343-206ENST00000598478 LTV1Q96GA3 475 aaPredicted RBP10.9□□□□□ -0.66
LINC00343-206ENST00000598478 ARHGAP9Q9BRR9 750 aa10.9□□□□□ -0.66
LINC00343-206ENST00000598478 FKBPLQ9UIM3 349 aa10.9□□□□□ -0.66
LINC00343-206ENST00000598478 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
LINC00343-206ENST00000598478 KIF13BQ9NQT8 1826 aa10.89□□□□□ -0.67
LINC00343-206ENST00000598478 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
LINC00343-206ENST00000598478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC00343-206ENST00000598478 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
LINC00343-206ENST00000598478 TNRC6CQ9HCJ0 1690 aaKnown RBP10.89□□□□□ -0.67
LINC00343-206ENST00000598478 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
LINC00343-206ENST00000598478 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
LINC00343-206ENST00000598478 ZCRB1Q8TBF4 217 aaKnown RBP10.88□□□□□ -0.67
LINC00343-206ENST00000598478 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
LINC00343-206ENST00000598478 RGPD2P0DJD1 1756 aa10.88□□□□□ -0.67
LINC00343-206ENST00000598478 FOXN1O15353 648 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 NME9Q86XW9 330 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 SLC10A4Q96EP9 437 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
LINC00343-206ENST00000598478 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 BRCA1P38398 1863 aaKnown RBP10.87□□□□□ -0.67
LINC00343-206ENST00000598478 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
LINC00343-206ENST00000598478 C10orf71Q711Q0 1435 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 MEGF6O75095 1541 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 TTLL8A6PVC2 850 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 MMP10P09238 476 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 DPEP1P16444 411 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 CBLBQ13191 982 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 NR6A1Q15406 480 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.67
LINC00343-206ENST00000598478 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
LINC00343-206ENST00000598478 KCTD15Q96SI1 283 aaPredicted RBP10.86□□□□□ -0.67
LINC00343-206ENST00000598478 RNF181Q9P0P0 153 aa10.86□□□□□ -0.67
LINC00343-206ENST00000598478 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
LINC00343-206ENST00000598478 ZC3H4Q9UPT8 1303 aaKnown RBP10.85□□□□□ -0.67
LINC00343-206ENST00000598478 TGFB2P61812 414 aa10.85□□□□□ -0.67
LINC00343-206ENST00000598478 Q6ZVU0 165 aa10.85□□□□□ -0.67
LINC00343-206ENST00000598478 ZBTB33Q86T24 672 aa10.85□□□□□ -0.67
LINC00343-206ENST00000598478 CDV3Q9UKY7 258 aaKnown RBP10.85□□□□□ -0.67
LINC00343-206ENST00000598478 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 MPRIPQ6WCQ1 1025 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC00343-206ENST00000598478 KDM4CQ9H3R0 1056 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
LINC00343-206ENST00000598478 USP31Q70CQ4 1352 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 SBF1O95248 1867 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
LINC00343-206ENST00000598478 KCNA3P22001 575 aa10.83□□□□□ -0.68
LINC00343-206ENST00000598478 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
LINC00343-206ENST00000598478 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
LINC00343-206ENST00000598478 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 SPINT1O43278 529 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 SSFA2P28290 1259 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 PTSQ03393 145 aa10.82□□□□□ -0.68
LINC00343-206ENST00000598478 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
LINC00343-206ENST00000598478 LINC00116Q8NCU8 138 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms