RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 POLLQ9UGP5 575 aa14.11□□□□□ -0.15
SMG9-206ENST00000597598 LAMB2P55268 1798 aa14.11□□□□□ -0.15
SMG9-206ENST00000597598 ERBB4Q15303 1308 aa14.11□□□□□ -0.15
SMG9-206ENST00000597598 HCLS1P14317 486 aaPredicted RBP14.1□□□□□ -0.15
SMG9-206ENST00000597598 MYL6BP14649 208 aa14.1□□□□□ -0.15
SMG9-206ENST00000597598 EN2P19622 333 aaPredicted RBP14.1□□□□□ -0.15
SMG9-206ENST00000597598 EIF4A1P60842 406 aaKnown RBP14.1□□□□□ -0.15
SMG9-206ENST00000597598 OTOP1Q7RTM1 612 aa14.1□□□□□ -0.15
SMG9-206ENST00000597598 RIMBP2O15034 1052 aa14.09□□□□□ -0.15
SMG9-206ENST00000597598 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
SMG9-206ENST00000597598 NSFL1CQ9UNZ2 370 aaKnown RBP14.09□□□□□ -0.15
SMG9-206ENST00000597598 TRIM17Q9Y577 477 aa14.09□□□□□ -0.15
SMG9-206ENST00000597598 COL6A3P12111 3177 aa14.08□□□□□ -0.15
SMG9-206ENST00000597598 ALDH1A1P00352 501 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 DOK7Q18PE1 504 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 NLRP10Q86W26 655 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 AGBL3Q8NEM8 1001 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 PNISRQ8TF01 805 aaKnown RBP14.08□□□□□ -0.16
SMG9-206ENST00000597598 GMLQ99445 158 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 EYA3Q99504 573 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 SCN9AQ15858 1988 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 TAF1P21675 1872 aa14.08□□□□□ -0.16
SMG9-206ENST00000597598 DDX60Q8IY21 1712 aaKnown RBP14.07□□□□□ -0.16
SMG9-206ENST00000597598 C6orf229H3BNL8 230 aa14.07□□□□□ -0.16
SMG9-206ENST00000597598 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
SMG9-206ENST00000597598 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
SMG9-206ENST00000597598 GPSM2P81274 684 aa14.06□□□□□ -0.16
SMG9-206ENST00000597598 PDIA6Q15084 440 aa14.06□□□□□ -0.16
SMG9-206ENST00000597598 RSBN1LQ6PCB5 846 aaPredicted RBP14.06□□□□□ -0.16
SMG9-206ENST00000597598 TBC1D16Q8TBP0 767 aa14.06□□□□□ -0.16
SMG9-206ENST00000597598 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
SMG9-206ENST00000597598 INHBEP58166 350 aa14.05□□□□□ -0.16
SMG9-206ENST00000597598 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
SMG9-206ENST00000597598 HSP90AB3PQ58FF7 597 aa14.05□□□□□ -0.16
SMG9-206ENST00000597598 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
SMG9-206ENST00000597598 MYOZ2Q9NPC6 264 aa14.05□□□□□ -0.16
SMG9-206ENST00000597598 TRMT112Q9UI30 125 aaKnown RBP14.05□□□□□ -0.16
SMG9-206ENST00000597598 H0YGN5 161 aa14.04□□□□□ -0.16
SMG9-206ENST00000597598 PTPN12Q05209 780 aaKnown RBP14.04□□□□□ -0.16
SMG9-206ENST00000597598 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
SMG9-206ENST00000597598 LDLRAD1Q5T700 205 aa14.04□□□□□ -0.16
SMG9-206ENST00000597598 SPRYD7Q5W111 196 aa14.04□□□□□ -0.16
SMG9-206ENST00000597598 ZC3H12CQ9C0D7 883 aaKnown RBP14.04□□□□□ -0.16
SMG9-206ENST00000597598 PODXL2Q9NZ53 605 aa14.04□□□□□ -0.16
SMG9-206ENST00000597598 USP17L8P0C7I0 530 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 TCIRG1Q13488 830 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 PRAMEF18Q5VWM3 479 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 IFNL1Q8IU54 200 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 ERO1AQ96HE7 468 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 ZNF333Q96JL9 665 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
SMG9-206ENST00000597598 NUDCQ9Y266 331 aa14.03□□□□□ -0.16
SMG9-206ENST00000597598 MANSC4A6NHS7 340 aaPredicted RBP14.02□□□□□ -0.17
SMG9-206ENST00000597598 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.17
SMG9-206ENST00000597598 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
SMG9-206ENST00000597598 SCAF8Q9UPN6 1271 aaKnown RBP14.02□□□□□ -0.17
SMG9-206ENST00000597598 U2AF1L5P0DN76 240 aaPredicted RBP14.01□□□□□ -0.17
SMG9-206ENST00000597598 NF2P35240 595 aa14.01□□□□□ -0.17
SMG9-206ENST00000597598 U2AF1Q01081 240 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMG9-206ENST00000597598 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
SMG9-206ENST00000597598 NBPF9Q3BBW0 867 aa14.01□□□□□ -0.17
SMG9-206ENST00000597598 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
SMG9-206ENST00000597598 COL4A1P02462 1669 aa14.01□□□□□ -0.17
SMG9-206ENST00000597598 PSME4Q14997 1843 aa14□□□□□ -0.17
SMG9-206ENST00000597598 CAP1Q01518 475 aa14□□□□□ -0.17
SMG9-206ENST00000597598 ARMC9Q7Z3E5 817 aa14□□□□□ -0.17
SMG9-206ENST00000597598 PRO3102Q9H379 93 aa14□□□□□ -0.17
SMG9-206ENST00000597598 EFCC1Q9HA90 598 aa14□□□□□ -0.17
SMG9-206ENST00000597598 RBM27Q9P2N5 1060 aaKnown RBP14□□□□□ -0.17
SMG9-206ENST00000597598 IGF2BP3O00425 579 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMG9-206ENST00000597598 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
SMG9-206ENST00000597598 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
SMG9-206ENST00000597598 CHRDL2Q6WN34 429 aa13.99□□□□□ -0.17
SMG9-206ENST00000597598 COPS6Q7L5N1 327 aa13.99□□□□□ -0.17
SMG9-206ENST00000597598 CD99L2Q8TCZ2 262 aa13.99□□□□□ -0.17
SMG9-206ENST00000597598 WNT10BO00744 389 aa13.98□□□□□ -0.17
SMG9-206ENST00000597598 ZBTB48P10074 688 aaPredicted RBP13.98□□□□□ -0.17
SMG9-206ENST00000597598 MAP3K11Q16584 847 aa13.98□□□□□ -0.17
SMG9-206ENST00000597598 PODNQ7Z5L7 613 aa13.98□□□□□ -0.17
SMG9-206ENST00000597598 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
SMG9-206ENST00000597598 LAMB1P07942 1786 aa13.98□□□□□ -0.17
SMG9-206ENST00000597598 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 G3V3G9 751 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 UFL1O94874 794 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 ANXA1P04083 346 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 SP3Q02447 781 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 NBPF11Q86T75 865 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 GGA1Q9UJY5 639 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
SMG9-206ENST00000597598 CLSPNQ9HAW4 1339 aa13.96□□□□□ -0.17
SMG9-206ENST00000597598 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
SMG9-206ENST00000597598 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.17
SMG9-206ENST00000597598 MMP14P50281 582 aa13.96□□□□□ -0.17
SMG9-206ENST00000597598 CRHR2Q13324 411 aa13.96□□□□□ -0.17
SMG9-206ENST00000597598 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
SMG9-206ENST00000597598 SLC10A4Q96EP9 437 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms