RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
LINC00343-204ENST00000596398 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
LINC00343-204ENST00000596398 C5P01031 1676 aa10.98□□□□□ -0.65
LINC00343-204ENST00000596398 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
LINC00343-204ENST00000596398 FSTL1Q12841 308 aa10.97□□□□□ -0.65
LINC00343-204ENST00000596398 AMIGO3Q86WK7 504 aa10.97□□□□□ -0.65
LINC00343-204ENST00000596398 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
LINC00343-204ENST00000596398 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
LINC00343-204ENST00000596398 USP54Q70EL1 1684 aa10.97□□□□□ -0.65
LINC00343-204ENST00000596398 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
LINC00343-204ENST00000596398 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
LINC00343-204ENST00000596398 LTN1O94822 1766 aa10.95□□□□□ -0.66
LINC00343-204ENST00000596398 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
LINC00343-204ENST00000596398 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
LINC00343-204ENST00000596398 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
LINC00343-204ENST00000596398 CCDC116Q8IYX3 515 aa10.95□□□□□ -0.66
LINC00343-204ENST00000596398 ANKRD24Q8TF21 1146 aa10.95□□□□□ -0.66
LINC00343-204ENST00000596398 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
LINC00343-204ENST00000596398 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
LINC00343-204ENST00000596398 TAF1LQ8IZX4 1826 aa10.94□□□□□ -0.66
LINC00343-204ENST00000596398 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
LINC00343-204ENST00000596398 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
LINC00343-204ENST00000596398 TOGARAM1Q9Y4F4 1720 aa10.94□□□□□ -0.66
LINC00343-204ENST00000596398 KIAA1551Q9HCM1 1747 aa10.93□□□□□ -0.66
LINC00343-204ENST00000596398 TSEN34Q9BSV6 310 aaKnown RBP10.93□□□□□ -0.66
LINC00343-204ENST00000596398 RRAGCQ9HB90 399 aa10.93□□□□□ -0.66
LINC00343-204ENST00000596398 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
LINC00343-204ENST00000596398 USP47Q96K76 1375 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 A0A0G2JLW4 131 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 NBPF1Q3BBV0 1214 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 C9orf131Q5VYM1 1079 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 FLAD1Q8NFF5 587 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 DNMT3LQ9UJW3 386 aa10.92□□□□□ -0.66
LINC00343-204ENST00000596398 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
LINC00343-204ENST00000596398 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
LINC00343-204ENST00000596398 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
LINC00343-204ENST00000596398 C4BP0C0L5 1744 aa10.91□□□□□ -0.66
LINC00343-204ENST00000596398 PKD1L3Q7Z443 1732 aa10.91□□□□□ -0.66
LINC00343-204ENST00000596398 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
LINC00343-204ENST00000596398 PDXDC2PQ6P474 469 aa10.9□□□□□ -0.66
LINC00343-204ENST00000596398 LTV1Q96GA3 475 aaPredicted RBP10.9□□□□□ -0.66
LINC00343-204ENST00000596398 ARHGAP9Q9BRR9 750 aa10.9□□□□□ -0.66
LINC00343-204ENST00000596398 FKBPLQ9UIM3 349 aa10.9□□□□□ -0.66
LINC00343-204ENST00000596398 TTC21AQ8NDW8 1320 aa10.89□□□□□ -0.67
LINC00343-204ENST00000596398 KIF13BQ9NQT8 1826 aa10.89□□□□□ -0.67
LINC00343-204ENST00000596398 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
LINC00343-204ENST00000596398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC00343-204ENST00000596398 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
LINC00343-204ENST00000596398 TNRC6CQ9HCJ0 1690 aaKnown RBP10.89□□□□□ -0.67
LINC00343-204ENST00000596398 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
LINC00343-204ENST00000596398 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
LINC00343-204ENST00000596398 ZCRB1Q8TBF4 217 aaKnown RBP10.88□□□□□ -0.67
LINC00343-204ENST00000596398 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
LINC00343-204ENST00000596398 RGPD2P0DJD1 1756 aa10.88□□□□□ -0.67
LINC00343-204ENST00000596398 FOXN1O15353 648 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 NME9Q86XW9 330 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 SLC10A4Q96EP9 437 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
LINC00343-204ENST00000596398 PALLDQ8WX93 1383 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 PLEKHG2Q9H7P9 1386 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 BRCA1P38398 1863 aaKnown RBP10.87□□□□□ -0.67
LINC00343-204ENST00000596398 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
LINC00343-204ENST00000596398 C10orf71Q711Q0 1435 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 MEGF6O75095 1541 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 TTLL8A6PVC2 850 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 MMP10P09238 476 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 DPEP1P16444 411 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 CBLBQ13191 982 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 NR6A1Q15406 480 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.67
LINC00343-204ENST00000596398 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
LINC00343-204ENST00000596398 KCTD15Q96SI1 283 aaPredicted RBP10.86□□□□□ -0.67
LINC00343-204ENST00000596398 RNF181Q9P0P0 153 aa10.86□□□□□ -0.67
LINC00343-204ENST00000596398 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
LINC00343-204ENST00000596398 ZC3H4Q9UPT8 1303 aaKnown RBP10.85□□□□□ -0.67
LINC00343-204ENST00000596398 TGFB2P61812 414 aa10.85□□□□□ -0.67
LINC00343-204ENST00000596398 Q6ZVU0 165 aa10.85□□□□□ -0.67
LINC00343-204ENST00000596398 ZBTB33Q86T24 672 aa10.85□□□□□ -0.67
LINC00343-204ENST00000596398 CDV3Q9UKY7 258 aaKnown RBP10.85□□□□□ -0.67
LINC00343-204ENST00000596398 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 PPP2R2DQ66LE6 453 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 MPRIPQ6WCQ1 1025 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC00343-204ENST00000596398 KDM4CQ9H3R0 1056 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 MKRN1Q9UHC7 482 aaKnown RBP10.84□□□□□ -0.67
LINC00343-204ENST00000596398 USP31Q70CQ4 1352 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 SBF1O95248 1867 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
LINC00343-204ENST00000596398 KCNA3P22001 575 aa10.83□□□□□ -0.68
LINC00343-204ENST00000596398 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
LINC00343-204ENST00000596398 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
LINC00343-204ENST00000596398 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
LINC00343-204ENST00000596398 SPINT1O43278 529 aa10.82□□□□□ -0.68
LINC00343-204ENST00000596398 SSFA2P28290 1259 aa10.82□□□□□ -0.68
LINC00343-204ENST00000596398 PTSQ03393 145 aa10.82□□□□□ -0.68
LINC00343-204ENST00000596398 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
LINC00343-204ENST00000596398 LINC00116Q8NCU8 138 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms