RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 GNPATO15228 680 aa17.53■□□□□ 0.4
PAF1-204ENST00000595564 MCM2P49736 904 aa17.53■□□□□ 0.4
PAF1-204ENST00000595564 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
PAF1-204ENST00000595564 KCNJ4P48050 445 aa17.52■□□□□ 0.4
PAF1-204ENST00000595564 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
PAF1-204ENST00000595564 SBF2Q86WG5 1849 aa17.52■□□□□ 0.39
PAF1-204ENST00000595564 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.39
PAF1-204ENST00000595564 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
PAF1-204ENST00000595564 VGLL2Q8N8G2 317 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 MAP4K1Q92918 833 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 NARFQ9UHQ1 456 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
PAF1-204ENST00000595564 RGL2O15211 777 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 CHGBP05060 677 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 BICDL1Q6ZP65 573 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
PAF1-204ENST00000595564 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
PAF1-204ENST00000595564 LRP5O75197 1615 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 SCN7AQ01118 1682 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 PDE8BO95263 885 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
PAF1-204ENST00000595564 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
PAF1-204ENST00000595564 IL27Q8NEV9 243 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 KCNB2Q92953 911 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
PAF1-204ENST00000595564 BCL2L12Q9HB09 334 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 SRP68Q9UHB9 627 aaKnown RBP17.5■□□□□ 0.39
PAF1-204ENST00000595564 LY75O60449 1722 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 MROH5Q6ZUA9 1318 aa17.5■□□□□ 0.39
PAF1-204ENST00000595564 LAMB2P55268 1798 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 ZPR1O75312 459 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 ERFEQ4G0M1 354 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 MCMDC2Q4G0Z9 681 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
PAF1-204ENST00000595564 TAF5LO75529 589 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
PAF1-204ENST00000595564 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
PAF1-204ENST00000595564 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
PAF1-204ENST00000595564 RTL9Q8NET4 1388 aa17.48■□□□□ 0.39
PAF1-204ENST00000595564 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
PAF1-204ENST00000595564 CCDC129Q6ZRS4 1044 aa17.48■□□□□ 0.39
PAF1-204ENST00000595564 TICAM2Q86XR7 235 aa17.48■□□□□ 0.39
PAF1-204ENST00000595564 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
PAF1-204ENST00000595564 SPEF2Q9C093 1822 aa17.48■□□□□ 0.39
PAF1-204ENST00000595564 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
PAF1-204ENST00000595564 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
PAF1-204ENST00000595564 GTF2E1P29083 439 aaPredicted RBP17.47■□□□□ 0.39
PAF1-204ENST00000595564 SCARF1Q14162 830 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
PAF1-204ENST00000595564 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
PAF1-204ENST00000595564 SLC27A2O14975 620 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 RNF113AO15541 343 aaKnown RBP17.47■□□□□ 0.39
PAF1-204ENST00000595564 RAB3GAP1Q15042 981 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 AMIGO3Q86WK7 504 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 ARHGEF1Q92888 912 aaKnown RBP17.47■□□□□ 0.39
PAF1-204ENST00000595564 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 HELLSQ9NRZ9 838 aa17.47■□□□□ 0.39
PAF1-204ENST00000595564 TAF1LQ8IZX4 1826 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 ADCK5Q3MIX3 580 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 SLFNL1Q499Z3 407 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 FAM196AQ6ZSG2 479 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 KRT27Q7Z3Y8 459 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
PAF1-204ENST00000595564 LPIN2Q92539 896 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 TTC14Q96N46 770 aa17.46■□□□□ 0.39
PAF1-204ENST00000595564 CWC22Q9HCG8 908 aaKnown RBP17.46■□□□□ 0.39
PAF1-204ENST00000595564 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 PHF14O94880 888 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 CPA1P15085 419 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 SSFA2P28290 1259 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 ZAP70P43403 619 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 ZMYM1Q5SVZ6 1142 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
PAF1-204ENST00000595564 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
PAF1-204ENST00000595564 SLC5A1P13866 664 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 FGFR2P21802 821 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 LRRFIP1Q32MZ4 808 aaKnown RBP17.44■□□□□ 0.38
PAF1-204ENST00000595564 TRAPPC3LQ5T215 181 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
PAF1-204ENST00000595564 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
PAF1-204ENST00000595564 ZSWIM6Q9HCJ5 1215 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 MCM4P33991 863 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 RFC4P35249 363 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 MCAMP43121 646 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 AK2P54819 239 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 CUL4AQ13619 759 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 SF3B3Q15393 1217 aaKnown RBP17.44■□□□□ 0.38
PAF1-204ENST00000595564 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 PI16Q6UXB8 463 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
PAF1-204ENST00000595564 LRRC4BQ9NT99 713 aa17.44■□□□□ 0.38
PAF1-204ENST00000595564 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms