RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 MED23Q9ULK4 1368 aa18.15■□□□□ 0.5
ZNF541-205ENST00000595558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.14■□□□□ 0.49
ZNF541-205ENST00000595558 A0A0G2JLW4 131 aa18.14■□□□□ 0.49
ZNF541-205ENST00000595558 LRRC2Q9BYS8 371 aa18.14■□□□□ 0.49
ZNF541-205ENST00000595558 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
ZNF541-205ENST00000595558 SNRKQ9NRH2 765 aa18.14■□□□□ 0.49
ZNF541-205ENST00000595558 SIPA1L3O60292 1781 aaPredicted RBP18.14■□□□□ 0.49
ZNF541-205ENST00000595558 TAF5LO75529 589 aa18.14■□□□□ 0.49
ZNF541-205ENST00000595558 GTF2F1P35269 517 aaKnown RBP eCLIP18.14■□□□□ 0.49
ZNF541-205ENST00000595558 LRRC24Q50LG9 513 aa18.14■□□□□ 0.49
ZNF541-205ENST00000595558 PUS3Q9BZE2 481 aaKnown RBP18.14■□□□□ 0.49
ZNF541-205ENST00000595558 CAMTA1Q9Y6Y1 1673 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 EVA1CP58658 441 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 BCL2L12Q9HB09 334 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 RIOK3O14730 519 aaKnown RBP18.13■□□□□ 0.49
ZNF541-205ENST00000595558 TNNI3KQ59H18 835 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.13■□□□□ 0.49
ZNF541-205ENST00000595558 KIF3AQ9Y496 699 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 FPGT-TNNI3KV9GXZ4 949 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 ELP1O95163 1332 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 COL18A1P39060 1754 aa18.13■□□□□ 0.49
ZNF541-205ENST00000595558 HIP1O00291 1037 aa18.12■□□□□ 0.49
ZNF541-205ENST00000595558 FOSBP53539 338 aa18.12■□□□□ 0.49
ZNF541-205ENST00000595558 CCDC186Q7Z3E2 898 aa18.12■□□□□ 0.49
ZNF541-205ENST00000595558 GOLGA6L4A6NEF3 574 aa18.12■□□□□ 0.49
ZNF541-205ENST00000595558 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
ZNF541-205ENST00000595558 RNF20Q5VTR2 975 aa18.12■□□□□ 0.49
ZNF541-205ENST00000595558 MTERF4Q7Z6M4 381 aaKnown RBP18.12■□□□□ 0.49
ZNF541-205ENST00000595558 PDCP20941 246 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 CASP7P55210 303 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 CCDC94Q9BW85 323 aaPredicted RBP18.11■□□□□ 0.49
ZNF541-205ENST00000595558 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 FOXO4P98177 505 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 DNAJC25Q9H1X3 360 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 HDAC5Q9UQL6 1122 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
ZNF541-205ENST00000595558 A0A0G2JS52 829 aa18.1■□□□□ 0.49
ZNF541-205ENST00000595558 PLBD2Q8NHP8 589 aa18.1■□□□□ 0.49
ZNF541-205ENST00000595558 BRF1Q92994 677 aa18.1■□□□□ 0.49
ZNF541-205ENST00000595558 FTOQ9C0B1 505 aaKnown RBP eCLIP18.1■□□□□ 0.49
ZNF541-205ENST00000595558 PRDM4Q9UKN5 801 aa18.1■□□□□ 0.49
ZNF541-205ENST00000595558 SCN11AQ9UI33 1791 aa18.1■□□□□ 0.49
ZNF541-205ENST00000595558 A0A087WWV3 80 aa18.1■□□□□ 0.49
ZNF541-205ENST00000595558 ANKRD1Q15327 319 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 Q6ZUG5 572 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 BICD2Q8TD16 824 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
ZNF541-205ENST00000595558 DRC7Q8IY82 874 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 FAM89AQ96GI7 184 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 CLSTN2Q9H4D0 955 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 COPRSQ9NQ92 184 aa18.09■□□□□ 0.49
ZNF541-205ENST00000595558 ATP2B3Q16720 1220 aa18.08■□□□□ 0.49
ZNF541-205ENST00000595558 GTF3C6Q969F1 213 aa18.08■□□□□ 0.49
ZNF541-205ENST00000595558 TRIM5Q9C035 493 aa18.08■□□□□ 0.49
ZNF541-205ENST00000595558 CYP21A2P08686 494 aa18.08■□□□□ 0.48
ZNF541-205ENST00000595558 IL2RBP14784 551 aa18.08■□□□□ 0.48
ZNF541-205ENST00000595558 CBX1P83916 185 aa18.08■□□□□ 0.48
ZNF541-205ENST00000595558 RESTQ13127 1097 aa18.08■□□□□ 0.48
ZNF541-205ENST00000595558 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
ZNF541-205ENST00000595558 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
ZNF541-205ENST00000595558 KIF1AQ12756 1690 aa18.08■□□□□ 0.48
ZNF541-205ENST00000595558 JCADQ9P266 1359 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 GOLIM4O00461 696 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 GPTP24298 496 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 PPP4R3BQ5MIZ7 849 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 ATG9AQ7Z3C6 839 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 ZNF609O15014 1411 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 GOLGA6L6A8MZA4 724 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
ZNF541-205ENST00000595558 ZNF75DP51815 510 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 USPL1Q5W0Q7 1092 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
ZNF541-205ENST00000595558 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
ZNF541-205ENST00000595558 ALDH8A1Q9H2A2 487 aaPredicted RBP18.07■□□□□ 0.48
ZNF541-205ENST00000595558 ZNF165P49910 485 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 SCRN1Q12765 414 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 CCDC144BQ3MJ40 725 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 TSGA10IPQ3SY00 556 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 RBM43Q6ZSC3 357 aaKnown RBP18.06■□□□□ 0.48
ZNF541-205ENST00000595558 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 C16orf45Q96MC5 204 aaPredicted RBP18.06■□□□□ 0.48
ZNF541-205ENST00000595558 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
ZNF541-205ENST00000595558 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 HMG20BQ9P0W2 317 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 PCDH11XQ9BZA7 1347 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 PCDH11YQ9BZA8 1340 aa18.06■□□□□ 0.48
ZNF541-205ENST00000595558 RABL6Q3YEC7 729 aaPredicted RBP18.05■□□□□ 0.48
ZNF541-205ENST00000595558 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
ZNF541-205ENST00000595558 ARID5BQ14865 1188 aa18.05■□□□□ 0.48
ZNF541-205ENST00000595558 PI16Q6UXB8 463 aa18.05■□□□□ 0.48
ZNF541-205ENST00000595558 CHST3Q7LGC8 479 aa18.05■□□□□ 0.48
ZNF541-205ENST00000595558 PIGBQ92521 554 aa18.05■□□□□ 0.48
ZNF541-205ENST00000595558 ADAMTS7Q9UKP4 1686 aa18.05■□□□□ 0.48
ZNF541-205ENST00000595558 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 H3BQV1 296 aa18.04■□□□□ 0.48
ZNF541-205ENST00000595558 H7C1W4 665 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms