RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 FLIIQ13045 1269 aa23.6■■□□□ 1.37
IRF3-209ENST00000595034 COL13A1Q5TAT6 717 aaPredicted RBP23.6■■□□□ 1.37
IRF3-209ENST00000595034 PAXIP1Q6ZW49 1069 aaPredicted RBP23.6■■□□□ 1.37
IRF3-209ENST00000595034 MICALL2Q8IY33 904 aa23.6■■□□□ 1.37
IRF3-209ENST00000595034 TNS4Q8IZW8 715 aa23.6■■□□□ 1.37
IRF3-209ENST00000595034 JARID2Q92833 1246 aaPredicted RBP23.6■■□□□ 1.37
IRF3-209ENST00000595034 CCDC85AQ96PX6 553 aaPredicted RBP23.6■■□□□ 1.37
IRF3-209ENST00000595034 XDHP47989 1333 aa23.59■■□□□ 1.37
IRF3-209ENST00000595034 NEURL1BA8MQ27 555 aa23.59■■□□□ 1.37
IRF3-209ENST00000595034 PSMD14O00487 310 aa23.59■■□□□ 1.37
IRF3-209ENST00000595034 IGKV5-2P06315 115 aa23.59■■□□□ 1.37
IRF3-209ENST00000595034 DOK7Q18PE1 504 aa23.59■■□□□ 1.37
IRF3-209ENST00000595034 ATP2B4P23634 1241 aa23.58■■□□□ 1.37
IRF3-209ENST00000595034 CWF19L2Q2TBE0 894 aaKnown RBP23.58■■□□□ 1.37
IRF3-209ENST00000595034 CDC37L1Q7L3B6 337 aa23.58■■□□□ 1.37
IRF3-209ENST00000595034 FAM9BQ8IZU0 186 aa23.58■■□□□ 1.37
IRF3-209ENST00000595034 TAF1P21675 1872 aa23.58■■□□□ 1.36
IRF3-209ENST00000595034 MAP2K1Q02750 393 aaPredicted RBP23.57■■□□□ 1.36
IRF3-209ENST00000595034 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
IRF3-209ENST00000595034 PGAP2Q9UHJ9 254 aa23.57■■□□□ 1.36
IRF3-209ENST00000595034 WDR33Q9C0J8 1336 aaKnown RBP23.57■■□□□ 1.36
IRF3-209ENST00000595034 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
IRF3-209ENST00000595034 G2E3Q7L622 706 aa23.56■■□□□ 1.36
IRF3-209ENST00000595034 TTLL11Q8NHH1 800 aa23.56■■□□□ 1.36
IRF3-209ENST00000595034 DNAAF4Q8WXU2 420 aa23.56■■□□□ 1.36
IRF3-209ENST00000595034 ZBTB12Q9Y330 459 aaPredicted RBP23.56■■□□□ 1.36
IRF3-209ENST00000595034 TRAF5O00463 557 aa23.55■■□□□ 1.36
IRF3-209ENST00000595034 EXOSC9Q06265 439 aaKnown RBP23.55■■□□□ 1.36
IRF3-209ENST00000595034 LINS1Q8NG48 757 aa23.55■■□□□ 1.36
IRF3-209ENST00000595034 BSDC1Q9NW68 430 aaPredicted RBP23.55■■□□□ 1.36
IRF3-209ENST00000595034 RTL9Q8NET4 1388 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 H7C1W4 665 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 VAMP4O75379 141 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 CELF2O95319 508 aaKnown RBP23.54■■□□□ 1.36
IRF3-209ENST00000595034 CTCFP49711 727 aaPredicted RBP23.54■■□□□ 1.36
IRF3-209ENST00000595034 GCKRQ14397 625 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 TRPM4Q8TD43 1214 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 BEGAINQ9BUH8 593 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 TLL2Q9Y6L7 1015 aa23.54■■□□□ 1.36
IRF3-209ENST00000595034 DCPSQ96C86 337 aaKnown RBP23.53■■□□□ 1.36
IRF3-209ENST00000595034 GPR101Q96P66 508 aaPredicted RBP23.53■■□□□ 1.36
IRF3-209ENST00000595034 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
IRF3-209ENST00000595034 GREM2Q9H772 168 aa23.53■■□□□ 1.36
IRF3-209ENST00000595034 VIL1P09327 827 aaKnown RBP23.52■■□□□ 1.36
IRF3-209ENST00000595034 PODNQ7Z5L7 613 aa23.52■■□□□ 1.36
IRF3-209ENST00000595034 CAPNS2Q96L46 248 aa23.52■■□□□ 1.36
IRF3-209ENST00000595034 ZNF408Q9H9D4 720 aa23.52■■□□□ 1.36
IRF3-209ENST00000595034 HIRAP54198 1017 aaPredicted RBP23.51■■□□□ 1.35
IRF3-209ENST00000595034 GRM1Q13255 1194 aa23.51■■□□□ 1.35
IRF3-209ENST00000595034 TBC1D10BQ4KMP7 808 aaPredicted RBP23.51■■□□□ 1.35
IRF3-209ENST00000595034 CST9Q5W186 159 aa23.51■■□□□ 1.35
IRF3-209ENST00000595034 SAMD7Q7Z3H4 446 aa23.51■■□□□ 1.35
IRF3-209ENST00000595034 MPHOSPH8Q99549 860 aa23.51■■□□□ 1.35
IRF3-209ENST00000595034 PLA2G12BQ9BX93 195 aa23.51■■□□□ 1.35
IRF3-209ENST00000595034 FOXN1O15353 648 aa23.5■■□□□ 1.35
IRF3-209ENST00000595034 FMR1Q06787 632 aaKnown RBP eCLIP23.5■■□□□ 1.35
IRF3-209ENST00000595034 RBM26Q5T8P6 1007 aaKnown RBP23.5■■□□□ 1.35
IRF3-209ENST00000595034 AGBL3Q8NEM8 1001 aa23.5■■□□□ 1.35
IRF3-209ENST00000595034 ANKRD2Q9GZV1 360 aa23.5■■□□□ 1.35
IRF3-209ENST00000595034 PRDM10Q9NQV6 1147 aa23.5■■□□□ 1.35
IRF3-209ENST00000595034 WBP1LQ9NX94 342 aa23.5■■□□□ 1.35
IRF3-209ENST00000595034 MINPP1Q9UNW1 487 aa23.5■■□□□ 1.35
IRF3-209ENST00000595034 COL4A1P02462 1669 aa23.49■■□□□ 1.35
IRF3-209ENST00000595034 KIF4BQ2VIQ3 1234 aa23.49■■□□□ 1.35
IRF3-209ENST00000595034 RSBN1LQ6PCB5 846 aaPredicted RBP23.49■■□□□ 1.35
IRF3-209ENST00000595034 HHIPL1Q96JK4 782 aa23.49■■□□□ 1.35
IRF3-209ENST00000595034 MED23Q9ULK4 1368 aa23.49■■□□□ 1.35
IRF3-209ENST00000595034 SHTN1A0MZ66 631 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 USP17L3A6NCW0 530 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 USP17L4A6NCW7 530 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 ITGA6P23229 1130 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 USP17L1Q7RTZ2 530 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 KRT26Q7Z3Y9 468 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 SAPCD2Q86UD0 394 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 USP48Q86UV5 1035 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 KCNQ5Q9NR82 932 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 LEMD3Q9Y2U8 911 aa23.48■■□□□ 1.35
IRF3-209ENST00000595034 KCNJ4P48050 445 aa23.47■■□□□ 1.35
IRF3-209ENST00000595034 CCT4P50991 539 aaKnown RBP23.47■■□□□ 1.35
IRF3-209ENST00000595034 CYP4F22Q6NT55 531 aa23.47■■□□□ 1.35
IRF3-209ENST00000595034 SULF1Q8IWU6 871 aa23.47■■□□□ 1.35
IRF3-209ENST00000595034 ANKRD18BA2A2Z9 1011 aa23.46■■□□□ 1.35
IRF3-209ENST00000595034 MAP2K2P36507 400 aa23.46■■□□□ 1.35
IRF3-209ENST00000595034 TRPM7Q96QT4 1865 aa23.46■■□□□ 1.35
IRF3-209ENST00000595034 ZNF609O15014 1411 aa23.45■■□□□ 1.34
IRF3-209ENST00000595034 COA1Q9GZY4 146 aa23.45■■□□□ 1.34
IRF3-209ENST00000595034 MYO3BQ8WXR4 1341 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 CSF1RP07333 972 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 USP17L8P0C7I0 530 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 IFIT5Q13325 482 aaKnown RBP23.44■■□□□ 1.34
IRF3-209ENST00000595034 FAM161AQ3B820 660 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 OGFOD1Q8N543 542 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 C2orf69Q8N8R5 385 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 CHMP3Q9Y3E7 222 aa23.44■■□□□ 1.34
IRF3-209ENST00000595034 MYH3P11055 1940 aa23.43■■□□□ 1.34
IRF3-209ENST00000595034 CASP7P55210 303 aa23.43■■□□□ 1.34
IRF3-209ENST00000595034 FBXW7Q969H0 707 aa23.43■■□□□ 1.34
IRF3-209ENST00000595034 C9orf78Q9NZ63 289 aaPredicted RBP23.43■■□□□ 1.34
IRF3-209ENST00000595034 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
IRF3-209ENST00000595034 ZNF804BA4D1E1 1349 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms