RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 GGA1Q9UJY5 639 aa29.96■■■□□ 2.39
LSM4-204ENST00000594828 CACNA1FO60840 1977 aa29.95■■■□□ 2.39
LSM4-204ENST00000594828 UFL1O94874 794 aa29.95■■■□□ 2.39
LSM4-204ENST00000594828 DOK7Q18PE1 504 aa29.95■■■□□ 2.39
LSM4-204ENST00000594828 ECE2O60344 883 aa29.94■■■□□ 2.38
LSM4-204ENST00000594828 GREM2Q9H772 168 aa29.94■■■□□ 2.38
LSM4-204ENST00000594828 CNOT7Q9UIV1 285 aaKnown RBP29.93■■■□□ 2.38
LSM4-204ENST00000594828 G3V3G9 751 aa29.92■■■□□ 2.38
LSM4-204ENST00000594828 PSMD14O00487 310 aa29.92■■■□□ 2.38
LSM4-204ENST00000594828 DCAF8Q5TAQ9 597 aa29.92■■■□□ 2.38
LSM4-204ENST00000594828 PLA2G12BQ9BX93 195 aa29.92■■■□□ 2.38
LSM4-204ENST00000594828 ZBTB12Q9Y330 459 aaPredicted RBP29.92■■■□□ 2.38
LSM4-204ENST00000594828 XDHP47989 1333 aa29.92■■■□□ 2.38
LSM4-204ENST00000594828 ZNF521Q96K83 1311 aa29.92■■■□□ 2.38
LSM4-204ENST00000594828 RTL9Q8NET4 1388 aa29.91■■■□□ 2.38
LSM4-204ENST00000594828 KCNQ5Q9NR82 932 aa29.91■■■□□ 2.38
LSM4-204ENST00000594828 BSDC1Q9NW68 430 aaPredicted RBP29.91■■■□□ 2.38
LSM4-204ENST00000594828 F6X3S4 739 aa29.9■■■□□ 2.38
LSM4-204ENST00000594828 H7C1D1 291 aa29.9■■■□□ 2.38
LSM4-204ENST00000594828 CASP7P55210 303 aa29.9■■■□□ 2.38
LSM4-204ENST00000594828 DPF2Q92785 391 aa29.9■■■□□ 2.38
LSM4-204ENST00000594828 CNTNAP1P78357 1384 aa29.9■■■□□ 2.38
LSM4-204ENST00000594828 ATP2B4P23634 1241 aa29.88■■■□□ 2.37
LSM4-204ENST00000594828 MICALL2Q8IY33 904 aa29.88■■■□□ 2.37
LSM4-204ENST00000594828 MINPP1Q9UNW1 487 aa29.88■■■□□ 2.37
LSM4-204ENST00000594828 MYH3P11055 1940 aa29.88■■■□□ 2.37
LSM4-204ENST00000594828 SHTN1A0MZ66 631 aa29.87■■■□□ 2.37
LSM4-204ENST00000594828 HIRAP54198 1017 aaPredicted RBP29.87■■■□□ 2.37
LSM4-204ENST00000594828 BEND3Q5T5X7 828 aa29.87■■■□□ 2.37
LSM4-204ENST00000594828 PGAP2Q9UHJ9 254 aa29.87■■■□□ 2.37
LSM4-204ENST00000594828 CSF1RP07333 972 aa29.86■■■□□ 2.37
LSM4-204ENST00000594828 RPS12P25398 132 aaKnown RBP29.86■■■□□ 2.37
LSM4-204ENST00000594828 IGHMBP2P38935 993 aaKnown RBP29.86■■■□□ 2.37
LSM4-204ENST00000594828 FMR1Q06787 632 aaKnown RBP eCLIP29.86■■■□□ 2.37
LSM4-204ENST00000594828 TRPM4Q8TD43 1214 aa29.86■■■□□ 2.37
LSM4-204ENST00000594828 ZC3H15Q8WU90 426 aaKnown RBP29.86■■■□□ 2.37
LSM4-204ENST00000594828 TRAF5O00463 557 aa29.85■■■□□ 2.37
LSM4-204ENST00000594828 ITGA6P23229 1130 aa29.85■■■□□ 2.37
LSM4-204ENST00000594828 HSPA1AP0DMV8 641 aaKnown RBP29.84■■■□□ 2.37
LSM4-204ENST00000594828 HSPA1BP0DMV9 641 aaKnown RBP29.84■■■□□ 2.37
LSM4-204ENST00000594828 DEFB115Q30KQ5 88 aa29.84■■■□□ 2.37
LSM4-204ENST00000594828 ABT1Q9ULW3 272 aaKnown RBP29.84■■■□□ 2.37
LSM4-204ENST00000594828 VIL1P09327 827 aaKnown RBP29.83■■■□□ 2.37
LSM4-204ENST00000594828 VEGFBP49765 207 aa29.83■■■□□ 2.37
LSM4-204ENST00000594828 FAM161AQ3B820 660 aa29.83■■■□□ 2.37
LSM4-204ENST00000594828 RASSF10A6NK89 507 aa29.82■■■□□ 2.36
LSM4-204ENST00000594828 IFFO2Q5TF58 517 aa29.82■■■□□ 2.36
LSM4-204ENST00000594828 SAMD7Q7Z3H4 446 aa29.82■■■□□ 2.36
LSM4-204ENST00000594828 MPHOSPH8Q99549 860 aa29.82■■■□□ 2.36
LSM4-204ENST00000594828 WTIPA6NIX2 430 aaPredicted RBP29.81■■■□□ 2.36
LSM4-204ENST00000594828 E9PSI1 815 aa29.81■■■□□ 2.36
LSM4-204ENST00000594828 CCT4P50991 539 aaKnown RBP29.81■■■□□ 2.36
LSM4-204ENST00000594828 CST9Q5W186 159 aa29.81■■■□□ 2.36
LSM4-204ENST00000594828 GLIS2Q9BZE0 524 aaPredicted RBP29.81■■■□□ 2.36
LSM4-204ENST00000594828 SLC4A10Q6U841 1118 aa29.8■■■□□ 2.36
LSM4-204ENST00000594828 PODNQ7Z5L7 613 aa29.8■■■□□ 2.36
LSM4-204ENST00000594828 ANKRD18BA2A2Z9 1011 aa29.79■■■□□ 2.36
LSM4-204ENST00000594828 TBC1D10BQ4KMP7 808 aaPredicted RBP29.79■■■□□ 2.36
LSM4-204ENST00000594828 CDC37L1Q7L3B6 337 aa29.79■■■□□ 2.36
LSM4-204ENST00000594828 LEMD3Q9Y2U8 911 aa29.79■■■□□ 2.36
LSM4-204ENST00000594828 SPEF2Q9C093 1822 aa29.78■■■□□ 2.36
LSM4-204ENST00000594828 FOXO4P98177 505 aa29.78■■■□□ 2.36
LSM4-204ENST00000594828 RBM26Q5T8P6 1007 aaKnown RBP29.78■■■□□ 2.36
LSM4-204ENST00000594828 ANKRD2Q9GZV1 360 aa29.78■■■□□ 2.36
LSM4-204ENST00000594828 MED23Q9ULK4 1368 aa29.77■■■□□ 2.36
LSM4-204ENST00000594828 SCN9AQ15858 1988 aa29.77■■■□□ 2.36
LSM4-204ENST00000594828 GRM8O00222 908 aa29.77■■■□□ 2.36
LSM4-204ENST00000594828 ALDH1L1O75891 902 aa29.77■■■□□ 2.36
LSM4-204ENST00000594828 SRCIN1Q9C0H9 1055 aa29.77■■■□□ 2.36
LSM4-204ENST00000594828 C9orf78Q9NZ63 289 aaPredicted RBP29.77■■■□□ 2.36
LSM4-204ENST00000594828 EGFRP00533 1210 aa29.76■■■□□ 2.35
LSM4-204ENST00000594828 SLFN5Q08AF3 891 aa29.76■■■□□ 2.35
LSM4-204ENST00000594828 IFIT5Q13325 482 aaKnown RBP29.76■■■□□ 2.35
LSM4-204ENST00000594828 RSBN1LQ6PCB5 846 aaPredicted RBP29.76■■■□□ 2.35
LSM4-204ENST00000594828 AGBL3Q8NEM8 1001 aa29.76■■■□□ 2.35
LSM4-204ENST00000594828 CHMP3Q9Y3E7 222 aa29.76■■■□□ 2.35
LSM4-204ENST00000594828 USP17L3A6NCW0 530 aa29.75■■■□□ 2.35
LSM4-204ENST00000594828 USP17L4A6NCW7 530 aa29.75■■■□□ 2.35
LSM4-204ENST00000594828 CCER2I3L3R5 266 aa29.75■■■□□ 2.35
LSM4-204ENST00000594828 CELF2O95319 508 aaKnown RBP29.75■■■□□ 2.35
LSM4-204ENST00000594828 COL13A1Q5TAT6 717 aaPredicted RBP29.75■■■□□ 2.35
LSM4-204ENST00000594828 USP17L1Q7RTZ2 530 aa29.75■■■□□ 2.35
LSM4-204ENST00000594828 MRPL50Q8N5N7 158 aaKnown RBP29.75■■■□□ 2.35
LSM4-204ENST00000594828 PCNTO95613 3336 aa29.74■■■□□ 2.35
LSM4-204ENST00000594828 USP48Q86UV5 1035 aa29.74■■■□□ 2.35
LSM4-204ENST00000594828 TRPM7Q96QT4 1865 aa29.74■■■□□ 2.35
LSM4-204ENST00000594828 ZNF804BA4D1E1 1349 aa29.73■■■□□ 2.35
LSM4-204ENST00000594828 WDR33Q9C0J8 1336 aaKnown RBP29.73■■■□□ 2.35
LSM4-204ENST00000594828 CHRNDQ07001 517 aa29.73■■■□□ 2.35
LSM4-204ENST00000594828 KIF4BQ2VIQ3 1234 aa29.73■■■□□ 2.35
LSM4-204ENST00000594828 LMBR1LQ6UX01 489 aa29.73■■■□□ 2.35
LSM4-204ENST00000594828 TLL2Q9Y6L7 1015 aa29.73■■■□□ 2.35
LSM4-204ENST00000594828 EPHA10Q5JZY3 1008 aa29.72■■■□□ 2.35
LSM4-204ENST00000594828 DCPSQ96C86 337 aaKnown RBP29.72■■■□□ 2.35
LSM4-204ENST00000594828 COA1Q9GZY4 146 aa29.72■■■□□ 2.35
LSM4-204ENST00000594828 PAXIP1Q6ZW49 1069 aaPredicted RBP29.71■■■□□ 2.35
LSM4-204ENST00000594828 TXNRD3Q86VQ6 643 aa29.71■■■□□ 2.35
LSM4-204ENST00000594828 CDCA7LQ96GN5 454 aa29.71■■■□□ 2.35
LSM4-204ENST00000594828 ZNF408Q9H9D4 720 aa29.71■■■□□ 2.35
LSM4-204ENST00000594828 ZNF609O15014 1411 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms