RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 PLEKHA4Q9H4M7 779 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 UGGT1Q9NYU2 1555 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 TNRQ92752 1358 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 EP400NLQ6ZTU2 488 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 BIRC2Q13490 618 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 SIRT2Q8IXJ6 389 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 PPP1R13BQ96KQ4 1090 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 FAN1Q9Y2M0 1017 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 MAST1Q9Y2H9 1570 aa14.14□□□□□ -0.15
LIG1-207ENST00000594759 PSDA5PKW4 1024 aaPredicted RBP14.13□□□□□ -0.15
LIG1-207ENST00000594759 NPATQ14207 1427 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 TTC5Q8N0Z6 440 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 GCKP35557 465 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 TTC6Q86TZ1 520 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 CTCFLQ8NI51 663 aaPredicted RBP14.13□□□□□ -0.15
LIG1-207ENST00000594759 CCDC114Q96M63 670 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 NDUFAB1O14561 156 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 B4GALNT4Q76KP1 1039 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 ZBTB12Q9Y330 459 aaPredicted RBP14.13□□□□□ -0.15
LIG1-207ENST00000594759 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 SSBP05455 408 aaKnown RBP eCLIP14.13□□□□□ -0.15
LIG1-207ENST00000594759 NEDD9Q14511 834 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 DYDC1Q8WWB3 177 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 LZTFL1Q9NQ48 299 aa14.13□□□□□ -0.15
LIG1-207ENST00000594759 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 RSRC1Q96IZ7 334 aaKnown RBP14.12□□□□□ -0.15
LIG1-207ENST00000594759 HIP1O00291 1037 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 ZEB2O60315 1214 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 CDC25BP30305 580 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 HSPA4P34932 840 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 GUCY1B3Q02153 619 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 IQCEQ6IPM2 695 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 ZNF530Q6P9A1 599 aaPredicted RBP14.12□□□□□ -0.15
LIG1-207ENST00000594759 RABGGTAQ92696 567 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 PCMTD1Q96MG8 357 aaPredicted RBP14.12□□□□□ -0.15
LIG1-207ENST00000594759 PAIP2Q9BPZ3 127 aaKnown RBP14.12□□□□□ -0.15
LIG1-207ENST00000594759 ZSCAN16Q9H4T2 348 aaPredicted RBP14.12□□□□□ -0.15
LIG1-207ENST00000594759 RIMS2Q9UQ26 1411 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 LRRIQ1Q96JM4 1722 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 PLA2G4AP47712 749 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 CCT5P48643 541 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 CCDC144BQ3MJ40 725 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 TMEM87AQ8NBN3 555 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 PARD6BQ9BYG5 372 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 UHRF1BP1LA0JNW5 1464 aa14.12□□□□□ -0.15
LIG1-207ENST00000594759 ADGBQ8N7X0 1667 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 PPFIA3O75145 1194 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 PIP4K2BP78356 416 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 CC2D1AQ6P1N0 951 aaPredicted RBP14.11□□□□□ -0.15
LIG1-207ENST00000594759 LEO1Q8WVC0 666 aaPredicted RBP14.11□□□□□ -0.15
LIG1-207ENST00000594759 ATRIPQ8WXE1 791 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 MYO5CQ9NQX4 1742 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 ATP2C2O75185 946 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 HDGFL1Q5TGJ6 251 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 CPLX2Q6PUV4 134 aaKnown RBP14.11□□□□□ -0.15
LIG1-207ENST00000594759 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 ATP10AO60312 1499 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 A0A1W2PP64 1363 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 CTAGE9A4FU28 777 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 NR1I2O75469 434 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 CCDC175P0C221 793 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 XPO4Q9C0E2 1151 aaKnown RBP14.11□□□□□ -0.15
LIG1-207ENST00000594759 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
LIG1-207ENST00000594759 TRIM29Q14134 588 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 FAM204AQ9H8W3 233 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 PPFIA4O75335 1185 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 HSP90AA4PQ58FG1 418 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 FAM71BQ8TC56 605 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 SLC24A3Q9HC58 644 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 CCDC151A5D8V7 595 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 TXLNAP40222 546 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 NAP1L1P55209 391 aaKnown RBP14.1□□□□□ -0.15
LIG1-207ENST00000594759 KRT24Q2M2I5 525 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 BCAS4Q8TDM0 211 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
LIG1-207ENST00000594759 STRN4Q9NRL3 753 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 DACH1Q9UI36 760 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 FHOD1Q9Y613 1164 aa14.1□□□□□ -0.15
LIG1-207ENST00000594759 ZNF569Q5MCW4 686 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 CCDC181Q5TID7 509 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 N4BP2L2Q92802 583 aaPredicted RBP14.09□□□□□ -0.15
LIG1-207ENST00000594759 PHACTR3Q96KR7 559 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 BAG1Q99933 345 aaPredicted RBP14.09□□□□□ -0.15
LIG1-207ENST00000594759 DONSONQ9NYP3 566 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 G3BP1Q13283 466 aaKnown RBP eCLIP14.09□□□□□ -0.154e-6■■■■□ 21.1
LIG1-207ENST00000594759 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 GOLGA6CA6NDK9 693 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 GOLGA6DP0CG33 693 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 PEX19P40855 299 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 GOLGA6AQ9NYA3 693 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 LCMT1Q9UIC8 334 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 CEP85LQ5SZL2 805 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 CCDC121Q6ZUS5 278 aa14.09□□□□□ -0.15
LIG1-207ENST00000594759 SPATS2LQ9NUQ6 558 aaKnown RBP14.09□□□□□ -0.15
LIG1-207ENST00000594759 GLRX3O76003 335 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms