RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
USE1-203ENST00000593597 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 RIC3Q7Z5B4 369 aa13.83□□□□□ -0.2
USE1-203ENST00000593597 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 ZIC5Q96T25 663 aa13.83□□□□□ -0.2
USE1-203ENST00000593597 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
USE1-203ENST00000593597 ASTN2O75129 1339 aaPredicted RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 ZNF609O15014 1411 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 USP48Q86UV5 1035 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 DPF2Q92785 391 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 TSR2Q969E8 191 aaKnown RBP13.82□□□□□ -0.2
USE1-203ENST00000593597 CCDC85AQ96PX6 553 aaPredicted RBP13.82□□□□□ -0.2
USE1-203ENST00000593597 METTL22Q9BUU2 404 aaPredicted RBP13.82□□□□□ -0.2
USE1-203ENST00000593597 ZNF408Q9H9D4 720 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 CACNA1FO60840 1977 aa13.82□□□□□ -0.2
USE1-203ENST00000593597 ADM5C9JUS6 153 aa13.81□□□□□ -0.2
USE1-203ENST00000593597 ECE1P42892 770 aa13.81□□□□□ -0.2
USE1-203ENST00000593597 CDC37L1Q7L3B6 337 aa13.81□□□□□ -0.2
USE1-203ENST00000593597 CCDC191Q8NCU4 936 aa13.81□□□□□ -0.2
USE1-203ENST00000593597 G2E3Q7L622 706 aa13.8□□□□□ -0.2
USE1-203ENST00000593597 HHIPL1Q96JK4 782 aa13.8□□□□□ -0.2
USE1-203ENST00000593597 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
USE1-203ENST00000593597 TNRC18O15417 2968 aaPredicted RBP13.8□□□□□ -0.2
USE1-203ENST00000593597 H7C1D1 291 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 PDE8AO60658 829 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 UFL1O94874 794 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 VIL1P09327 827 aaKnown RBP13.79□□□□□ -0.2
USE1-203ENST00000593597 MAP2K2P36507 400 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 EYA3Q99504 573 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
USE1-203ENST00000593597 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
USE1-203ENST00000593597 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
USE1-203ENST00000593597 FAM155AB1AL88 458 aaPredicted RBP13.78□□□□□ -0.2
USE1-203ENST00000593597 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
USE1-203ENST00000593597 CWF19L2Q2TBE0 894 aaKnown RBP13.78□□□□□ -0.2
USE1-203ENST00000593597 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
USE1-203ENST00000593597 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
USE1-203ENST00000593597 GMLQ99445 158 aa13.78□□□□□ -0.2
USE1-203ENST00000593597 CTSWP56202 376 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
USE1-203ENST00000593597 KIF4BQ2VIQ3 1234 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 CCDC152Q4G0S7 254 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 GREM2Q9H772 168 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 GGA3Q9NZ52 723 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
USE1-203ENST00000593597 PAPPA2Q9BXP8 1791 aa13.76□□□□□ -0.21
USE1-203ENST00000593597 XDHP47989 1333 aa13.76□□□□□ -0.21
USE1-203ENST00000593597 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
USE1-203ENST00000593597 HUNKP57058 714 aa13.76□□□□□ -0.21
USE1-203ENST00000593597 ZNF280AP59817 542 aaPredicted RBP13.76□□□□□ -0.21
USE1-203ENST00000593597 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
USE1-203ENST00000593597 TTLL11Q8NHH1 800 aa13.76□□□□□ -0.21
USE1-203ENST00000593597 ZC3H12CQ9C0D7 883 aaKnown RBP13.76□□□□□ -0.21
USE1-203ENST00000593597 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
USE1-203ENST00000593597 NEURL1BA8MQ27 555 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 CASP7P55210 303 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 CCDC27Q2M243 656 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
USE1-203ENST00000593597 TXNRD3Q86VQ6 643 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
USE1-203ENST00000593597 ECM29Q5VYK3 1845 aa13.75□□□□□ -0.21
USE1-203ENST00000593597 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
USE1-203ENST00000593597 KLRK1P26718 216 aa13.74□□□□□ -0.21
USE1-203ENST00000593597 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
USE1-203ENST00000593597 GBA2Q9HCG7 927 aaPredicted RBP13.74□□□□□ -0.21
USE1-203ENST00000593597 MINPP1Q9UNW1 487 aa13.74□□□□□ -0.21
USE1-203ENST00000593597 H7C1W4 665 aa13.73□□□□□ -0.21
USE1-203ENST00000593597 DDX58O95786 925 aaKnown RBP13.73□□□□□ -0.21
USE1-203ENST00000593597 TWISTNBQ3B726 338 aaPredicted RBP13.73□□□□□ -0.21
USE1-203ENST00000593597 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
USE1-203ENST00000593597 RGMBQ6NW40 437 aa13.73□□□□□ -0.21
USE1-203ENST00000593597 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
USE1-203ENST00000593597 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 ATP2B4P23634 1241 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 NOGQ13253 232 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 SCARF1Q14162 830 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 AGBL3Q8NEM8 1001 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 DCPSQ96C86 337 aaKnown RBP13.72□□□□□ -0.21
USE1-203ENST00000593597 MCOLN1Q9GZU1 580 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 BSDC1Q9NW68 430 aaPredicted RBP13.72□□□□□ -0.21
USE1-203ENST00000593597 LAMB1P07942 1786 aa13.72□□□□□ -0.21
USE1-203ENST00000593597 IL16Q14005 1332 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 IRS2Q9Y4H2 1338 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 SLC10A3P09131 477 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.21
USE1-203ENST00000593597 FLIIQ13045 1269 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 DACT2Q5SW24 774 aa13.71□□□□□ -0.21
USE1-203ENST00000593597 MOB2Q70IA6 237 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms