RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, human

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDLRAD4-218	ENST00000592991	VGLL2	Q8N8G2	317 aa		31.39	■■■□□ 2.62
LDLRAD4-218	ENST00000592991	DBNDD2	Q9BQY9	259 aa		31.39	■■■□□ 2.62
LDLRAD4-218	ENST00000592991		A0A1B0GUL6	1792 aa		31.39	■■■□□ 2.62
LDLRAD4-218	ENST00000592991	COL11A2	P13942	1736 aa	Predicted RBP	31.39	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	CRY2	Q49AN0	593 aa		31.38	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	ZBTB7A	O95365	584 aa		31.38	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	BMP2KL	Q5H9B9	411 aa		31.38	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	RPGR	Q92834	1020 aa	Known RBP	31.38	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	NEUROD6	Q96NK8	337 aa		31.38	■■■□□ 2.61
LDLRAD4-218	ENST00000592991		A0A1B0GUL7	405 aa		31.37	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	PI4K2B	Q8TCG2	481 aa		31.37	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	BRIP1	Q9BX63	1249 aa		31.37	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	GPR108	Q9NPR9	543 aa		31.37	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	MROH5	Q6ZUA9	1318 aa		31.36	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	TAF5L	O75529	589 aa		31.36	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	RPS8	P62241	208 aa	Known RBP	31.36	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	C8orf34	Q49A92	452 aa		31.36	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	SNAP23	O00161	211 aa		31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	PSD	A5PKW4	1024 aa	Predicted RBP	31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	ADORA1	P30542	326 aa		31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	CHRND	Q07001	517 aa		31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	SLC16A10	Q8TF71	515 aa		31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	ECHDC1	Q9NTX5	307 aa		31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	BSDC1	Q9NW68	430 aa	Predicted RBP	31.35	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	AOX1	Q06278	1338 aa		31.34	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	KLRG2	A4D1S0	409 aa	Predicted RBP	31.34	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	PDE8B	O95263	885 aa		31.34	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	GRAP	Q13588	217 aa		31.34	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	ATP2B3	Q16720	1220 aa		31.34	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	GRAPL	Q8TC17	118 aa	Predicted RBP	31.34	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	MAP4K4	O95819	1239 aa	Predicted RBP	31.33	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	TTC41P	Q6P2S7	1318 aa		31.33	■■■□□ 2.61
LDLRAD4-218	ENST00000592991	GPATCH3	Q96I76	525 aa		31.32	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	AKAP2	Q9Y2D5	859 aa		31.32	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	SDS	P20132	328 aa		31.31	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	RBM17	Q96I25	401 aa	Known RBP	31.31	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	MINPP1	Q9UNW1	487 aa		31.31	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	ATF5	Q9Y2D1	282 aa	Predicted RBP	31.31	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	XAGE2	Q96GT9	111 aa		31.3	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	WTIP	A6NIX2	430 aa	Predicted RBP	31.29	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	BACH2	Q9BYV9	841 aa		31.29	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	HOXA10	P31260	410 aa	Predicted RBP	31.28	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	PDE6B	P35913	854 aa		31.28	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	PUM3	Q15397	648 aa	Known RBP	31.28	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	ARAP2	Q8WZ64	1704 aa		31.28	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	CACNA1S	Q13698	1873 aa		31.28	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	GLRX3	O76003	335 aa	Known RBP	31.27	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	SRGN	P10124	158 aa		31.27	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	FGFR2	P21802	821 aa		31.27	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	BOLA2	Q9H3K6	86 aa		31.27	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	TRIM6-TRIM34	B2RNG4	842 aa		31.27	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	ERC2	O15083	957 aa		31.27	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	AK9	Q5TCS8	1911 aa		31.26	■■■□□ 2.6
LDLRAD4-218	ENST00000592991	TSHZ2	Q9NRE2	1034 aa		31.26	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	C2CD5	Q86YS7	1000 aa		31.25	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	RILPL2	Q969X0	211 aa		31.25	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	C10orf71	Q711Q0	1435 aa		31.25	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	NPR1	P16066	1061 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	CHRNA5	P30532	468 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	LPIN2	Q92539	896 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	CRAMP1	Q96RY5	1269 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	MTFR1L	Q9H019	292 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	NDUFB9	Q9Y6M9	179 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	GORAB	Q5T7V8	394 aa		31.24	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	ATP5J	P18859	108 aa		31.23	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	SLC5A1	P13866	664 aa		31.22	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.21	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	EDC3	Q96F86	508 aa	Known RBP	31.21	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	MASTL	Q96GX5	879 aa		31.2	■■■□□ 2.59
LDLRAD4-218	ENST00000592991	SEC24B	O95487	1268 aa		31.2	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	TTC39A	Q5SRH9	613 aa		31.2	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	TBC1D9	Q6ZT07	1266 aa		31.2	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	LRRC37A	A6NMS7	1700 aa		31.19	■■■□□ 2.58
LDLRAD4-218	ENST00000592991		H0YIN7	160 aa		31.19	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	PPEF1	O14829	653 aa	Predicted RBP	31.19	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	CDC45	O75419	566 aa		31.19	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	PHKA1	P46020	1223 aa		31.19	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	DNAJC2	Q99543	621 aa	Known RBP	31.19	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	BBOX1	O75936	387 aa		31.18	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	IFIT1	P09914	478 aa	Known RBP	31.18	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	KLRK1	P26718	216 aa		31.18	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	CCDC158	Q5M9N0	1113 aa		31.18	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	ANKRD2	Q9GZV1	360 aa		31.18	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	SCARF1	Q14162	830 aa		31.17	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	POLD1	P28340	1107 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	KCNJ4	P48050	445 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	GPSM2	P81274	684 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	CCDC102B	Q68D86	513 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	OLFM4	Q6UX06	510 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	CNTROB	Q8N137	903 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	ANKIB1	Q9P2G1	1089 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	KIF13B	Q9NQT8	1826 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	UBE4A	Q14139	1066 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	HAUS7	Q99871	368 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	SNRK	Q9NRH2	765 aa		31.16	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	SLX4	Q8IY92	1834 aa		31.15	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	BCAM	P50895	628 aa		31.14	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	STYK1	Q6J9G0	422 aa		31.14	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	PI16	Q6UXB8	463 aa		31.14	■■■□□ 2.58
LDLRAD4-218	ENST00000592991	GPR101	Q96P66	508 aa	Predicted RBP	31.14	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms