RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 GSTT1P30711 240 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 SOX18P35713 384 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 DBN1Q16643 649 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 MEI1Q5TIA1 1274 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 PEAR1Q5VY43 1037 aaPredicted RBP9.83□□□□□ -0.84
VMP1-215ENST00000592619 ZNF654Q8IZM8 581 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 GLIS3Q8NEA6 775 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 ZFATQ9P243 1243 aa9.83□□□□□ -0.84
VMP1-215ENST00000592619 BNIP3LO60238 219 aa9.82□□□□□ -0.84
VMP1-215ENST00000592619 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
VMP1-215ENST00000592619 CCDC155Q8N6L0 562 aa9.82□□□□□ -0.84
VMP1-215ENST00000592619 STRN4Q9NRL3 753 aa9.82□□□□□ -0.84
VMP1-215ENST00000592619 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
VMP1-215ENST00000592619 HCN2Q9UL51 889 aa9.82□□□□□ -0.84
VMP1-215ENST00000592619 SOBPA7XYQ1 873 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 KIF4AO95239 1232 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 ANKRD24Q8TF21 1146 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 UBXN4Q92575 508 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 KIFC2Q96AC6 838 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 EHD4Q9H223 541 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 ACBD3Q9H3P7 528 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 SENP2Q9HC62 589 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 SRA1Q9HD15 236 aaKnown RBP9.81□□□□□ -0.84
VMP1-215ENST00000592619 KANSL3Q9P2N6 904 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 GGT7Q9UJ14 662 aa9.81□□□□□ -0.84
VMP1-215ENST00000592619 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
VMP1-215ENST00000592619 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.81□□□□□ -0.84
VMP1-215ENST00000592619 LOC100996750A0A140TA64 210 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 PSAPP07602 524 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 XRCC5P13010 732 aaKnown RBP9.8□□□□□ -0.84
VMP1-215ENST00000592619 RACK1P63244 317 aaKnown RBP9.8□□□□□ -0.84
VMP1-215ENST00000592619 SPEM2Q0P670 501 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 GNL2Q13823 731 aaKnown RBP9.8□□□□□ -0.84
VMP1-215ENST00000592619 ERMP1Q7Z2K6 904 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 USP48Q86UV5 1035 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 NOC4LQ9BVI4 516 aaKnown RBP9.8□□□□□ -0.84
VMP1-215ENST00000592619 KRTAP4-6Q9BYQ5 205 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 LATS2Q9NRM7 1088 aa9.8□□□□□ -0.84
VMP1-215ENST00000592619 NFKB1P19838 968 aa9.79□□□□□ -0.84
VMP1-215ENST00000592619 ZNF394Q53GI3 561 aa9.79□□□□□ -0.84
VMP1-215ENST00000592619 FAM182BQ5T319 152 aa9.79□□□□□ -0.84
VMP1-215ENST00000592619 GMLQ99445 158 aa9.79□□□□□ -0.84
VMP1-215ENST00000592619 CAPN10Q9HC96 672 aa9.79□□□□□ -0.84
VMP1-215ENST00000592619 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
VMP1-215ENST00000592619 DACH1Q9UI36 760 aa9.79□□□□□ -0.84
VMP1-215ENST00000592619 ATXN7L1Q9ULK2 861 aaPredicted RBP9.79□□□□□ -0.84
VMP1-215ENST00000592619 PLAURQ03405 335 aa9.78□□□□□ -0.84
VMP1-215ENST00000592619 HYAL2Q12891 473 aa9.78□□□□□ -0.84
VMP1-215ENST00000592619 ZNF837Q96EG3 531 aaPredicted RBP9.78□□□□□ -0.84
VMP1-215ENST00000592619 SLC30A3Q99726 388 aa9.78□□□□□ -0.84
VMP1-215ENST00000592619 PPM1HQ9ULR3 514 aa9.78□□□□□ -0.84
VMP1-215ENST00000592619 WIPF1O43516 503 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 ITGA6P23229 1130 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 GRIN2CQ14957 1233 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 NCAPG2Q86XI2 1143 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 ABHD17AQ96GS6 310 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 ZFYVE1Q9HBF4 777 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 PHF24Q9UPV7 400 aa9.77□□□□□ -0.85
VMP1-215ENST00000592619 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 NFX1Q12986 1120 aaKnown RBP9.76□□□□□ -0.85
VMP1-215ENST00000592619 NEUROD1Q13562 356 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 CCNJLQ8IV13 435 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 CEP120Q8N960 986 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 TRIM47Q96LD4 638 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 TCF12Q99081 682 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 LIN7BQ9HAP6 207 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 ABCB6Q9NP58 842 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 PCDHGB7Q9Y5F8 929 aa9.76□□□□□ -0.85
VMP1-215ENST00000592619 CCDC180Q9P1Z9 1646 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 TNNI2P48788 182 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 NRLP54845 237 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 COL13A1Q5TAT6 717 aaPredicted RBP9.75□□□□□ -0.85
VMP1-215ENST00000592619 DHX32Q7L7V1 743 aaKnown RBP9.75□□□□□ -0.85
VMP1-215ENST00000592619 BHMTQ93088 406 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 CNTNAP3BQ96NU0 1288 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 OSMRQ99650 979 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 ZKSCAN3Q9BRR0 538 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 RSRP1Q9BUV0 290 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 CNTNAP3Q9BZ76 1288 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 INPP5FQ9Y2H2 1132 aa9.75□□□□□ -0.85
VMP1-215ENST00000592619 CD33P20138 364 aa9.74□□□□□ -0.85
VMP1-215ENST00000592619 FCGRTP55899 365 aa9.74□□□□□ -0.85
VMP1-215ENST00000592619 INSM1Q01101 510 aaPredicted RBP9.74□□□□□ -0.85
VMP1-215ENST00000592619 GTPBP3Q969Y2 492 aaKnown RBP9.74□□□□□ -0.85
VMP1-215ENST00000592619 OXCT2Q9BYC2 517 aaPredicted RBP9.74□□□□□ -0.85
VMP1-215ENST00000592619 TANGO6Q9C0B7 1094 aa9.74□□□□□ -0.85
VMP1-215ENST00000592619 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
VMP1-215ENST00000592619 PRKAG2Q9UGJ0 569 aa9.74□□□□□ -0.85
VMP1-215ENST00000592619 TTF2Q9UNY4 1162 aaKnown RBP9.74□□□□□ -0.85
VMP1-215ENST00000592619 FGFR3P22607 806 aa9.73□□□□□ -0.85
VMP1-215ENST00000592619 GJA8P48165 433 aa9.73□□□□□ -0.85
VMP1-215ENST00000592619 PWP1Q13610 501 aa9.73□□□□□ -0.85
VMP1-215ENST00000592619 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
VMP1-215ENST00000592619 ARMC5Q96C12 935 aa9.73□□□□□ -0.85
VMP1-215ENST00000592619 PPP1R1BQ9UD71 204 aaPredicted RBP9.73□□□□□ -0.85
VMP1-215ENST00000592619 RLBP1P12271 317 aa9.72□□□□□ -0.85
VMP1-215ENST00000592619 GPLD1P80108 840 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms