RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 TAF1P21675 1872 aa25.21■■□□□ 1.63
TNFRSF11A-204ENST00000592013 YDJCA8MPS7 323 aa25.2■■□□□ 1.62
TNFRSF11A-204ENST00000592013 COL13A1Q5TAT6 717 aaPredicted RBP25.2■■□□□ 1.62
TNFRSF11A-204ENST00000592013 MICALL2Q8IY33 904 aa25.2■■□□□ 1.62
TNFRSF11A-204ENST00000592013 SEC31BQ9NQW1 1179 aa25.2■■□□□ 1.62
TNFRSF11A-204ENST00000592013 FANCIQ9NVI1 1328 aa25.19■■□□□ 1.62
TNFRSF11A-204ENST00000592013 ATP2B4P23634 1241 aa25.19■■□□□ 1.62
TNFRSF11A-204ENST00000592013 FKBP5Q13451 457 aaPredicted RBP25.19■■□□□ 1.62
TNFRSF11A-204ENST00000592013 BEGAINQ9BUH8 593 aa25.19■■□□□ 1.62
TNFRSF11A-204ENST00000592013 RTL9Q8NET4 1388 aa25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 PCNTO95613 3336 aa25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 NEURL1BA8MQ27 555 aa25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 PSMD14O00487 310 aa25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 CTCFP49711 727 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 FLIIQ13045 1269 aa25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 PAXIP1Q6ZW49 1069 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF11A-204ENST00000592013 WDR33Q9C0J8 1336 aaKnown RBP25.17■■□□□ 1.62
TNFRSF11A-204ENST00000592013 IGKV5-2P06315 115 aa25.17■■□□□ 1.62
TNFRSF11A-204ENST00000592013 CACNA1FO60840 1977 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 IGHMBP2P38935 993 aaKnown RBP25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 DOK7Q18PE1 504 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 LINS1Q8NG48 757 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 DNAAF4Q8WXU2 420 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 HHIPL1Q96JK4 782 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 TRPM7Q96QT4 1865 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 PRDM10Q9NQV6 1147 aa25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 BSDC1Q9NW68 430 aaPredicted RBP25.16■■□□□ 1.62
TNFRSF11A-204ENST00000592013 TTLL11Q8NHH1 800 aa25.15■■□□□ 1.62
TNFRSF11A-204ENST00000592013 TLL2Q9Y6L7 1015 aa25.15■■□□□ 1.62
TNFRSF11A-204ENST00000592013 CELF2O95319 508 aaKnown RBP25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 UBE3BQ7Z3V4 1068 aa25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 PODNQ7Z5L7 613 aa25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 DCPSQ96C86 337 aaKnown RBP25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 CCDC85AQ96PX6 553 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 WBP1LQ9NX94 342 aa25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 ZBTB12Q9Y330 459 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF11A-204ENST00000592013 H7C1W4 665 aa25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 TRAF5O00463 557 aa25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 VIL1P09327 827 aaKnown RBP25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 GCKRQ14397 625 aa25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 CWF19L2Q2TBE0 894 aaKnown RBP25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 AGBL3Q8NEM8 1001 aa25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 CAPNS2Q96L46 248 aa25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 SALL2Q9Y467 1007 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MAP2K2P36507 400 aa25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 CST9Q5W186 159 aa25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 JARID2Q92833 1246 aaPredicted RBP25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 PLA2G12BQ9BX93 195 aa25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 GLIS2Q9BZE0 524 aaPredicted RBP25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 ANKRD2Q9GZV1 360 aa25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 ZNF609O15014 1411 aa25.12■■□□□ 1.61
TNFRSF11A-204ENST00000592013 VAMP4O75379 141 aa25.11■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MMP14P50281 582 aa25.11■■□□□ 1.61
TNFRSF11A-204ENST00000592013 TRPM4Q8TD43 1214 aa25.11■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MPHOSPH8Q99549 860 aa25.11■■□□□ 1.61
TNFRSF11A-204ENST00000592013 GREM2Q9H772 168 aa25.11■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MYH3P11055 1940 aa25.11■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MED23Q9ULK4 1368 aa25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 HIRAP54198 1017 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 EXOSC9Q06265 439 aaKnown RBP25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 G2E3Q7L622 706 aa25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 SAPCD2Q86UD0 394 aa25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 FAM9BQ8IZU0 186 aa25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 GPR101Q96P66 508 aaPredicted RBP25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 LEMD3Q9Y2U8 911 aa25.1■■□□□ 1.61
TNFRSF11A-204ENST00000592013 FOXN1O15353 648 aa25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 KIF4BQ2VIQ3 1234 aa25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 TBC1D10BQ4KMP7 808 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 RSBN1LQ6PCB5 846 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 SAMD7Q7Z3H4 446 aa25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 KRT26Q7Z3Y9 468 aa25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 SULF1Q8IWU6 871 aa25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 ZNF408Q9H9D4 720 aa25.09■■□□□ 1.61
TNFRSF11A-204ENST00000592013 USP17L3A6NCW0 530 aa25.08■■□□□ 1.61
TNFRSF11A-204ENST00000592013 USP17L4A6NCW7 530 aa25.08■■□□□ 1.61
TNFRSF11A-204ENST00000592013 CA12O43570 354 aa25.08■■□□□ 1.61
TNFRSF11A-204ENST00000592013 USP17L1Q7RTZ2 530 aa25.08■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MINPP1Q9UNW1 487 aa25.08■■□□□ 1.61
TNFRSF11A-204ENST00000592013 MYO3BQ8WXR4 1341 aa25.08■■□□□ 1.6
TNFRSF11A-204ENST00000592013 CCT4P50991 539 aaKnown RBP25.07■■□□□ 1.6
TNFRSF11A-204ENST00000592013 GRM1Q13255 1194 aa25.07■■□□□ 1.6
TNFRSF11A-204ENST00000592013 USP17L8P0C7I0 530 aa25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 ITGA6P23229 1130 aa25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 RBM26Q5T8P6 1007 aaKnown RBP25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 USP48Q86UV5 1035 aa25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 OGFOD1Q8N543 542 aa25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 C2orf69Q8N8R5 385 aa25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 COA1Q9GZY4 146 aa25.06■■□□□ 1.6
TNFRSF11A-204ENST00000592013 COL4A1P02462 1669 aa25.05■■□□□ 1.6
TNFRSF11A-204ENST00000592013 ANKRD18BA2A2Z9 1011 aa25.05■■□□□ 1.6
TNFRSF11A-204ENST00000592013 KCNJ4P48050 445 aa25.05■■□□□ 1.6
TNFRSF11A-204ENST00000592013 ZNF280AP59817 542 aaPredicted RBP25.05■■□□□ 1.6
TNFRSF11A-204ENST00000592013 CYP4F22Q6NT55 531 aa25.05■■□□□ 1.6
TNFRSF11A-204ENST00000592013 CSF1RP07333 972 aa25.04■■□□□ 1.6
TNFRSF11A-204ENST00000592013 FMR1Q06787 632 aaKnown RBP eCLIP25.04■■□□□ 1.6
TNFRSF11A-204ENST00000592013 KCNQ5Q9NR82 932 aa25.04■■□□□ 1.6
TNFRSF11A-204ENST00000592013 THSD7BQ9C0I4 1608 aa25.04■■□□□ 1.6
TNFRSF11A-204ENST00000592013 NOGQ13253 232 aa25.03■■□□□ 1.6
TNFRSF11A-204ENST00000592013 IFIT5Q13325 482 aaKnown RBP25.03■■□□□ 1.6
TNFRSF11A-204ENST00000592013 SHTN1A0MZ66 631 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms