RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 VAMP4O75379 141 aa29.56■■■□□ 2.32
LSM7-206ENST00000591515 MICALL2Q8IY33 904 aa29.56■■■□□ 2.32
LSM7-206ENST00000591515 CDCA7LQ96GN5 454 aa29.56■■■□□ 2.32
LSM7-206ENST00000591515 SOX10P56693 466 aa29.55■■■□□ 2.32
LSM7-206ENST00000591515 TRMT2AQ8IZ69 625 aaKnown RBP29.55■■■□□ 2.32
LSM7-206ENST00000591515 ZNF428Q96B54 188 aa29.55■■■□□ 2.32
LSM7-206ENST00000591515 DDX60Q8IY21 1712 aaKnown RBP29.54■■■□□ 2.32
LSM7-206ENST00000591515 H7C1D1 291 aa29.54■■■□□ 2.32
LSM7-206ENST00000591515 ANXA1P04083 346 aa29.54■■■□□ 2.32
LSM7-206ENST00000591515 CT47B1P0C2W7 299 aaPredicted RBP29.54■■■□□ 2.32
LSM7-206ENST00000591515 PROSER3Q2NL68 480 aa29.54■■■□□ 2.32
LSM7-206ENST00000591515 RGMBQ6NW40 437 aa29.54■■■□□ 2.32
LSM7-206ENST00000591515 COPS6Q7L5N1 327 aa29.54■■■□□ 2.32
LSM7-206ENST00000591515 DDX58O95786 925 aaKnown RBP29.53■■■□□ 2.32
LSM7-206ENST00000591515 AIMP1Q12904 312 aaKnown RBP29.53■■■□□ 2.32
LSM7-206ENST00000591515 XAGE3Q8WTP9 111 aa29.53■■■□□ 2.32
LSM7-206ENST00000591515 SAGE1Q9NXZ1 904 aa29.53■■■□□ 2.32
LSM7-206ENST00000591515 ZBTB12Q9Y330 459 aaPredicted RBP29.53■■■□□ 2.32
LSM7-206ENST00000591515 HCLS1P14317 486 aaPredicted RBP29.52■■■□□ 2.32
LSM7-206ENST00000591515 SAMD7Q7Z3H4 446 aa29.52■■■□□ 2.32
LSM7-206ENST00000591515 HSP90AB3PQ58FF7 597 aa29.51■■■□□ 2.31
LSM7-206ENST00000591515 GBA2Q9HCG7 927 aaPredicted RBP29.51■■■□□ 2.31
LSM7-206ENST00000591515 EGFRP00533 1210 aa29.5■■■□□ 2.31
LSM7-206ENST00000591515 GRAPQ13588 217 aa29.5■■■□□ 2.31
LSM7-206ENST00000591515 DDX46Q7L014 1031 aaKnown RBP29.5■■■□□ 2.31
LSM7-206ENST00000591515 KRT26Q7Z3Y9 468 aa29.5■■■□□ 2.31
LSM7-206ENST00000591515 GRAPLQ8TC17 118 aaPredicted RBP29.5■■■□□ 2.31
LSM7-206ENST00000591515 KIF23Q02241 960 aaPredicted RBP29.49■■■□□ 2.31
LSM7-206ENST00000591515 TBC1D10BQ4KMP7 808 aaPredicted RBP29.49■■■□□ 2.31
LSM7-206ENST00000591515 DPF2Q92785 391 aa29.49■■■□□ 2.31
LSM7-206ENST00000591515 SCN9AQ15858 1988 aa29.49■■■□□ 2.31
LSM7-206ENST00000591515 ADM5C9JUS6 153 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 PSMD14O00487 310 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 SLC4A2P04920 1241 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 ANKRD13DQ6ZTN6 518 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 NLRP10Q86W26 655 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 PLBD2Q8NHP8 589 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 RNF186Q9NXI6 227 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 CACNA1FO60840 1977 aa29.48■■■□□ 2.31
LSM7-206ENST00000591515 COL4A1P02462 1669 aa29.47■■■□□ 2.31
LSM7-206ENST00000591515 TRPA1O75762 1119 aa29.47■■■□□ 2.31
LSM7-206ENST00000591515 C2orf69Q8N8R5 385 aa29.46■■■□□ 2.31
LSM7-206ENST00000591515 CCDC102AQ96A19 550 aa29.46■■■□□ 2.31
LSM7-206ENST00000591515 DBNDD1Q9H9R9 158 aa29.46■■■□□ 2.31
LSM7-206ENST00000591515 ZNF157P51786 506 aaPredicted RBP29.45■■■□□ 2.31
LSM7-206ENST00000591515 RIC3Q7Z5B4 369 aa29.44■■■□□ 2.3
LSM7-206ENST00000591515 TMC4Q7Z404 712 aa29.43■■■□□ 2.3
LSM7-206ENST00000591515 PHAXQ9H814 394 aaKnown RBP29.43■■■□□ 2.3
LSM7-206ENST00000591515 TRMT112Q9UI30 125 aaKnown RBP29.43■■■□□ 2.3
LSM7-206ENST00000591515 SH3TC1Q8TE82 1336 aa29.43■■■□□ 2.3
LSM7-206ENST00000591515 SLC10A3P09131 477 aa29.42■■■□□ 2.3
LSM7-206ENST00000591515 ALDH1L2Q3SY69 923 aa29.42■■■□□ 2.3
LSM7-206ENST00000591515 DCPSQ96C86 337 aaKnown RBP29.42■■■□□ 2.3
LSM7-206ENST00000591515 RTL9Q8NET4 1388 aa29.41■■■□□ 2.3
LSM7-206ENST00000591515 WASHC4Q2M389 1173 aa29.41■■■□□ 2.3
LSM7-206ENST00000591515 RBM26Q5T8P6 1007 aaKnown RBP29.41■■■□□ 2.3
LSM7-206ENST00000591515 PRPF38BQ5VTL8 546 aaKnown RBP29.41■■■□□ 2.3
LSM7-206ENST00000591515 CSRNP1Q96S65 589 aa29.41■■■□□ 2.3
LSM7-206ENST00000591515 FLIIQ13045 1269 aa29.4■■■□□ 2.3
LSM7-206ENST00000591515 CTU1Q7Z7A3 348 aaKnown RBP29.4■■■□□ 2.3
LSM7-206ENST00000591515 KCNQ5Q9NR82 932 aa29.4■■■□□ 2.3
LSM7-206ENST00000591515 PSME4Q14997 1843 aa29.4■■■□□ 2.3
LSM7-206ENST00000591515 RIMBP2O15034 1052 aa29.39■■■□□ 2.3
LSM7-206ENST00000591515 RPS12P25398 132 aaKnown RBP29.39■■■□□ 2.3
LSM7-206ENST00000591515 TCIRG1Q13488 830 aa29.39■■■□□ 2.3
LSM7-206ENST00000591515 FKBP5Q13451 457 aaPredicted RBP29.38■■■□□ 2.29
LSM7-206ENST00000591515 KSR2Q6VAB6 950 aa29.38■■■□□ 2.29
LSM7-206ENST00000591515 CELF1Q92879 486 aaKnown RBP29.38■■■□□ 2.29
LSM7-206ENST00000591515 POLLQ9UGP5 575 aa29.38■■■□□ 2.29
LSM7-206ENST00000591515 NSFL1CQ9UNZ2 370 aaKnown RBP29.38■■■□□ 2.29
LSM7-206ENST00000591515 ECE2O60344 883 aa29.37■■■□□ 2.29
LSM7-206ENST00000591515 NEXNQ0ZGT2 675 aa29.37■■■□□ 2.29
LSM7-206ENST00000591515 GGA3Q9NZ52 723 aa29.37■■■□□ 2.29
LSM7-206ENST00000591515 ASTN2O75129 1339 aaPredicted RBP29.37■■■□□ 2.29
LSM7-206ENST00000591515 KIF4BQ2VIQ3 1234 aa29.36■■■□□ 2.29
LSM7-206ENST00000591515 SMC4Q9NTJ3 1288 aa29.36■■■□□ 2.29
LSM7-206ENST00000591515 PAPPA2Q9BXP8 1791 aa29.36■■■□□ 2.29
LSM7-206ENST00000591515 GPSM2P81274 684 aa29.35■■■□□ 2.29
LSM7-206ENST00000591515 DOK7Q18PE1 504 aa29.35■■■□□ 2.29
LSM7-206ENST00000591515 CDCA5Q96FF9 252 aa29.35■■■□□ 2.29
LSM7-206ENST00000591515 C6orf229H3BNL8 230 aa29.34■■■□□ 2.29
LSM7-206ENST00000591515 RASAL3Q86YV0 1011 aa29.34■■■□□ 2.29
LSM7-206ENST00000591515 SULF1Q8IWU6 871 aa29.34■■■□□ 2.29
LSM7-206ENST00000591515 SSH1Q8WYL5 1049 aa29.34■■■□□ 2.29
LSM7-206ENST00000591515 PI4KAP2A4QPH2 592 aa29.33■■■□□ 2.29
LSM7-206ENST00000591515 G2E3Q7L622 706 aa29.33■■■□□ 2.29
LSM7-206ENST00000591515 PI4KAP1Q8N8J0 262 aa29.33■■■□□ 2.29
LSM7-206ENST00000591515 YTHDC1Q96MU7 727 aaKnown RBP29.33■■■□□ 2.29
LSM7-206ENST00000591515 METTL22Q9BUU2 404 aaPredicted RBP29.33■■■□□ 2.29
LSM7-206ENST00000591515 HPS5Q9UPZ3 1129 aa29.33■■■□□ 2.29
LSM7-206ENST00000591515 MAP3K2Q9Y2U5 619 aa29.33■■■□□ 2.29
LSM7-206ENST00000591515 PTPRCP08575 1304 aa29.32■■■□□ 2.28
LSM7-206ENST00000591515 MRPL50Q8N5N7 158 aaKnown RBP29.32■■■□□ 2.28
LSM7-206ENST00000591515 TRIM28Q13263 835 aaKnown RBP29.31■■■□□ 2.28
LSM7-206ENST00000591515 SF3B3Q15393 1217 aaKnown RBP29.31■■■□□ 2.28
LSM7-206ENST00000591515 EYA3Q99504 573 aa29.3■■■□□ 2.28
LSM7-206ENST00000591515 MYD88Q99836 296 aa29.3■■■□□ 2.28
LSM7-206ENST00000591515 ISCA1Q9BUE6 129 aa29.3■■■□□ 2.28
LSM7-206ENST00000591515 VIL1P09327 827 aaKnown RBP29.29■■■□□ 2.28
LSM7-206ENST00000591515 REM2Q8IYK8 340 aaPredicted RBP29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms