RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
RETREG3-208ENST00000589797 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-208ENST00000589797 USP5P45974 858 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 UBE2HP62256 183 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
RETREG3-208ENST00000589797 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 LMTK3Q96Q04 1460 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 FRMPD1Q5SYB0 1578 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 PRC1O43663 620 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 GAS2L3Q86XJ1 694 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 MCM5P33992 734 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 PDE4CQ08493 712 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
RETREG3-208ENST00000589797 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
RETREG3-208ENST00000589797 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 RFC4P35249 363 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 ME3Q16798 604 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 CCDC152Q4G0S7 254 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 ZSCAN29Q8IWY8 852 aaPredicted RBP17.04■□□□□ 0.32
RETREG3-208ENST00000589797 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
RETREG3-208ENST00000589797 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
RETREG3-208ENST00000589797 SLC4A4Q9Y6R1 1079 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 RBSNQ9H1K0 784 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 BRMS1Q9HCU9 246 aa17.04■□□□□ 0.32
RETREG3-208ENST00000589797 SERPINC1P01008 464 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 METAP2P50579 478 aaKnown RBP eCLIP17.03■□□□□ 0.32
RETREG3-208ENST00000589797 ZNF589Q86UQ0 364 aaPredicted RBP17.03■□□□□ 0.32
RETREG3-208ENST00000589797 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
RETREG3-208ENST00000589797 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 PTPRUQ92729 1446 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 ADCY5O95622 1261 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
RETREG3-208ENST00000589797 MFSD6Q6ZSS7 791 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 MYL10Q9BUA6 226 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 CHGBP05060 677 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 ADORA1P30542 326 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
RETREG3-208ENST00000589797 F8W031 263 aaPredicted RBP17.02■□□□□ 0.32
RETREG3-208ENST00000589797 PRDM1O75626 825 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
RETREG3-208ENST00000589797 HMGN5P82970 282 aaKnown RBP17.02■□□□□ 0.32
RETREG3-208ENST00000589797 TCIRG1Q13488 830 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
RETREG3-208ENST00000589797 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 PTCH1Q13635 1447 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 DHX32Q7L7V1 743 aaKnown RBP17.02■□□□□ 0.32
RETREG3-208ENST00000589797 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.32
RETREG3-208ENST00000589797 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 KDRP35968 1356 aa17.02■□□□□ 0.32
RETREG3-208ENST00000589797 TOM1O60784 492 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 HOOK1Q9UJC3 728 aaKnown RBP17.02■□□□□ 0.31
RETREG3-208ENST00000589797 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 B4E1Z4 1266 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 ERCC4Q92889 916 aaPredicted RBP17.02■□□□□ 0.31
RETREG3-208ENST00000589797 TMEM63CQ9P1W3 806 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
RETREG3-208ENST00000589797 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
RETREG3-208ENST00000589797 CDKL5O76039 1030 aa17.01■□□□□ 0.31
RETREG3-208ENST00000589797 ZNF165P49910 485 aa17.01■□□□□ 0.31
RETREG3-208ENST00000589797 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
RETREG3-208ENST00000589797 TTC12Q9H892 705 aaPredicted RBP17.01■□□□□ 0.31
RETREG3-208ENST00000589797 GNPATO15228 680 aa17.01■□□□□ 0.31
RETREG3-208ENST00000589797 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
RETREG3-208ENST00000589797 NSFL1CQ9UNZ2 370 aaKnown RBP17.01■□□□□ 0.31
RETREG3-208ENST00000589797 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 RPS6KB1P23443 525 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 AK7Q96M32 723 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 NLRP3Q96P20 1036 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 GREM2Q9H772 168 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 STAP2Q9UGK3 403 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 GPAA1O43292 621 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 MBD4O95243 580 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 OSBPL3Q9H4L5 887 aa17■□□□□ 0.31
RETREG3-208ENST00000589797 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
RETREG3-208ENST00000589797 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 LAMC1P11047 1609 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 PRKCSHP14314 528 aaPredicted RBP16.99■□□□□ 0.31
RETREG3-208ENST00000589797 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
RETREG3-208ENST00000589797 IQCA1Q86XH1 822 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 PI4K2BQ8TCG2 481 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 PIGBQ92521 554 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
RETREG3-208ENST00000589797 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms