RNA–Protein interactions for RNA: ENST00000589162.1

CAPNS1-208, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-208ENST00000589162 DZIP3Q86Y13 1208 aaKnown RBP7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 ITPRIPQ8IWB1 547 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 AK7Q96M32 723 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 MYD88Q99836 296 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 PDGFDQ9GZP0 370 aaPredicted RBP7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 HYPKQ9NX55 129 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 RBM27Q9P2N5 1060 aaKnown RBP7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 PNMA3Q9UL41 463 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 CNTNAP4Q9C0A0 1308 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 COL15A1P39059 1388 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 AFDNP55196 1824 aaKnown RBP7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 UBR3Q6ZT12 1888 aa7.66□□□□□ -1.18
CAPNS1-208ENST00000589162 FAM181BA6NEQ2 426 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 RGPD3A6NKT7 1758 aaPredicted RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 FAM177BA6PVY3 158 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 PLSCR1O15162 318 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 ABCC4O15439 1325 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 RPS6KA4O75676 772 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 GPTP24298 496 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 IL6STP40189 918 aaPredicted RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 BRPF1P55201 1214 aaPredicted RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 RTL5Q5HYW3 569 aaPredicted RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 BCORQ6W2J9 1755 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 BICDL1Q6ZP65 573 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 RGPD4Q7Z3J3 1758 aa7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 API5Q9BZZ5 524 aaKnown RBP7.65□□□□□ -1.18
CAPNS1-208ENST00000589162 CACNA1FO60840 1977 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 SCN7AQ01118 1682 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 PTPRCP08575 1304 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 ERBB4Q15303 1308 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 RNF223E7ERA6 249 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 IPO8O15397 1037 aaKnown RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 RNF40O75150 1001 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 CAMTA2O94983 1202 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 IGKV5-2P06315 115 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 NEFLP07196 543 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 SLC27A3Q5K4L6 730 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 BEND3Q5T5X7 828 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 USPL1Q5W0Q7 1092 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 MSL1Q68DK7 614 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 KSR2Q6VAB6 950 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 KIF6Q6ZMV9 814 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 COL23A1Q86Y22 540 aaPredicted RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 CRIPAKQ8N1N5 446 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 SYNE4Q8N205 404 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 CCDC24Q8N4L8 307 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 PLBD2Q8NHP8 589 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 DNAAF4Q8WXU2 420 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 DDX12PQ92771 950 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 MEIS3Q99687 375 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 RTCBQ9Y3I0 505 aaKnown RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 NUP98P52948 1817 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 ANKRD36CQ5JPF3 1778 aa7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 N4BP2Q86UW6 1770 aaPredicted RBP7.64□□□□□ -1.19
CAPNS1-208ENST00000589162 MAP3K15Q6ZN16 1313 aa7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 PNPLA7Q6ZV29 1317 aa7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 SPDYE16A6NNV3 312 aaPredicted RBP7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 COPS2P61201 443 aa7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 NBR1Q14596 966 aa7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 MVPQ14764 893 aaKnown RBP7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 RC3H1Q5TC82 1133 aaKnown RBP7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 ARHGAP45Q92619 1136 aa7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 METTL22Q9BUU2 404 aaPredicted RBP7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 AAASQ9NRG9 546 aa7.63□□□□□ -1.19
CAPNS1-208ENST00000589162 UBN2Q6ZU65 1347 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 NEURL1BA8MQ27 555 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 SMAPO00193 183 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 DPYSL4O14531 572 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 GTPBP6O43824 516 aaPredicted RBP7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 DDX58O95786 925 aaKnown RBP7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 NBPF7P0C2Y1 421 aaPredicted RBP7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 PDE3AQ14432 1141 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 TBC1D9BQ66K14 1250 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 INTS3Q68E01 1043 aaKnown RBP7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 TFCP2L1Q9NZI6 479 aa7.62□□□□□ -1.19
CAPNS1-208ENST00000589162 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 ZBTB7BO15156 539 aaPredicted RBP7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 GDF9O60383 454 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 RFC4P35249 363 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 TCIRG1Q13488 830 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 SLC15A2Q16348 729 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 EPHA10Q5JZY3 1008 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 TRAPPC3LQ5T215 181 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 SUSD4Q5VX71 490 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 B4GALNT3Q6L9W6 998 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 NPM2Q86SE8 214 aaKnown RBP7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 SRCIN1Q9C0H9 1055 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 USP44Q9H0E7 712 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 NARFQ9UHQ1 456 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 PXDNLA1KZ92 1463 aa7.61□□□□□ -1.19
CAPNS1-208ENST00000589162 A0A087WZG4 1122 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms