RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 SNRKQ9NRH2 765 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 DDX41Q9UJV9 622 aaKnown RBP14.22□□□□□ -0.13
LRFN3-204ENST00000588831 RIMS1Q86UR5 1692 aaKnown RBP14.22□□□□□ -0.13
LRFN3-204ENST00000588831 MYD88Q99836 296 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 TPM3P06753 285 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 ME1P48163 572 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 CTR9Q6PD62 1173 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 SUCLG2Q96I99 432 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 CRB1P82279 1406 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
LRFN3-204ENST00000588831 CDK12Q9NYV4 1490 aaPredicted RBP14.22□□□□□ -0.13
LRFN3-204ENST00000588831 SMTNL1A8MU46 457 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 POLR3DP05423 398 aaPredicted RBP14.21□□□□□ -0.13
LRFN3-204ENST00000588831 MAP2K2P36507 400 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 ARHGAP29Q52LW3 1261 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 DNAJC21Q5F1R6 531 aaKnown RBP14.21□□□□□ -0.13
LRFN3-204ENST00000588831 CCDC91Q7Z6B0 441 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 TTC14Q96N46 770 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 RABEP2Q9H5N1 569 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 ZCCHC17Q9NP64 241 aaKnown RBP14.21□□□□□ -0.13
LRFN3-204ENST00000588831 ST3GAL1Q11201 340 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 CCDC171Q6TFL3 1326 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 SALL3Q9BXA9 1300 aa14.21□□□□□ -0.13
LRFN3-204ENST00000588831 SLC27A2O14975 620 aa14.21□□□□□ -0.14
LRFN3-204ENST00000588831 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.14
LRFN3-204ENST00000588831 HSP90B2PQ58FF3 399 aa14.21□□□□□ -0.14
LRFN3-204ENST00000588831 CCDC102AQ96A19 550 aa14.21□□□□□ -0.14
LRFN3-204ENST00000588831 SDF4Q9BRK5 362 aa14.21□□□□□ -0.14
LRFN3-204ENST00000588831 GJB4Q9NTQ9 266 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 STAP2Q9UGK3 403 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 MRVI1Q9Y6F6 885 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 URI1O94763 535 aaPredicted RBP14.2□□□□□ -0.14
LRFN3-204ENST00000588831 BIRC2Q13490 618 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 Q6ZUG5 572 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 FAM200AQ8TCP9 573 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 USP27XA6NNY8 438 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 ERCC6LQ2NKX8 1250 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 BEND3Q5T5X7 828 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 LRCH2Q5VUJ6 765 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 KIAA1524Q8TCG1 905 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 ORAI2Q96SN7 254 aa14.2□□□□□ -0.14
LRFN3-204ENST00000588831 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
LRFN3-204ENST00000588831 SMC2O95347 1197 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 MCM6Q14566 821 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 RPAINQ86UA6 219 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 NCAPGQ9BPX3 1015 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 SLC24A3Q9HC58 644 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 CEP83Q9Y592 693 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
LRFN3-204ENST00000588831 PLEKHG3A1L390 1219 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 ECM2O94769 699 aaPredicted RBP14.19□□□□□ -0.14
LRFN3-204ENST00000588831 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 PLCD4Q9BRC7 762 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 PLEKHA4Q9H4M7 779 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 FLT4P35916 1363 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 CCDC144BQ3MJ40 725 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 CCDC144CPQ8IYA2 1237 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 CACTINQ8WUQ7 758 aaKnown RBP14.19□□□□□ -0.14
LRFN3-204ENST00000588831 ATP7BP35670 1465 aa14.19□□□□□ -0.14
LRFN3-204ENST00000588831 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 MPHOSPH10O00566 681 aaKnown RBP14.18□□□□□ -0.14
LRFN3-204ENST00000588831 EIF4A1P60842 406 aaKnown RBP14.18□□□□□ -0.14
LRFN3-204ENST00000588831 RAPGEF4Q8WZA2 1011 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 AATKQ6ZMQ8 1374 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 PIK3R5Q8WYR1 880 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 GPHNQ9NQX3 736 aaPredicted RBP14.18□□□□□ -0.14
LRFN3-204ENST00000588831 NEBLO76041 1014 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 ATP2B1P20020 1258 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 SARNPP82979 210 aaKnown RBP14.18□□□□□ -0.14
LRFN3-204ENST00000588831 UVSSAQ2YD98 709 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
LRFN3-204ENST00000588831 FBXO38Q6PIJ6 1188 aa14.18□□□□□ -0.14
LRFN3-204ENST00000588831 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
LRFN3-204ENST00000588831 SASH1O94885 1247 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 CCDC172P0C7W6 258 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 CABLES1Q8TDN4 633 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 DDX17Q92841 729 aaKnown RBP14.17□□□□□ -0.14
LRFN3-204ENST00000588831 RRP15Q9Y3B9 282 aaKnown RBP14.17□□□□□ -0.14
LRFN3-204ENST00000588831 RXRAP19793 462 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 HSP90AB4PQ58FF6 505 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 PAXBP1Q9Y5B6 917 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 USP32Q8NFA0 1604 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 TIMM10P62072 90 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
LRFN3-204ENST00000588831 KMT5BQ4FZB7 885 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 VPS53Q5VIR6 699 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 C11orf57Q6ZUT1 292 aaPredicted RBP14.17□□□□□ -0.14
LRFN3-204ENST00000588831 CCAR1Q8IX12 1150 aaKnown RBP14.17□□□□□ -0.14
LRFN3-204ENST00000588831 EVI5LQ96CN4 794 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 TBX22Q9Y458 520 aa14.17□□□□□ -0.14
LRFN3-204ENST00000588831 MAP3K5Q99683 1374 aa14.16□□□□□ -0.14
LRFN3-204ENST00000588831 A0A1B0GVL5 298 aa14.16□□□□□ -0.14
LRFN3-204ENST00000588831 GOLGA8FQ08AF8 430 aa14.16□□□□□ -0.14
LRFN3-204ENST00000588831 GOLGA8DPQ0D2H9 430 aa14.16□□□□□ -0.14
LRFN3-204ENST00000588831 COPS6Q7L5N1 327 aa14.16□□□□□ -0.14
LRFN3-204ENST00000588831 CREBRFQ8IUR6 639 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms