RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 ADAMTSL1Q8N6G6 1762 aa27.75■■■□□ 2.03
CIRBP-219ENST00000588411 COL4A1P02462 1669 aa27.75■■■□□ 2.03
CIRBP-219ENST00000588411 XDHP47989 1333 aa27.74■■■□□ 2.03
CIRBP-219ENST00000588411 YDJCA8MPS7 323 aa27.74■■■□□ 2.03
CIRBP-219ENST00000588411 PLA2G12BQ9BX93 195 aa27.74■■■□□ 2.03
CIRBP-219ENST00000588411 GREM2Q9H772 168 aa27.74■■■□□ 2.03
CIRBP-219ENST00000588411 E9PSI1 815 aa27.73■■■□□ 2.03
CIRBP-219ENST00000588411 ECE2O60344 883 aa27.73■■■□□ 2.03
CIRBP-219ENST00000588411 LTBP1Q14766 1721 aa27.72■■■□□ 2.03
CIRBP-219ENST00000588411 TMEM88BA6NKF7 163 aa27.72■■■□□ 2.03
CIRBP-219ENST00000588411 BSDC1Q9NW68 430 aaPredicted RBP27.72■■■□□ 2.03
CIRBP-219ENST00000588411 ATP2B4P23634 1241 aa27.71■■■□□ 2.03
CIRBP-219ENST00000588411 IGHMBP2P38935 993 aaKnown RBP27.71■■■□□ 2.03
CIRBP-219ENST00000588411 DOK7Q18PE1 504 aa27.71■■■□□ 2.03
CIRBP-219ENST00000588411 F6X3S4 739 aa27.7■■■□□ 2.02
CIRBP-219ENST00000588411 H7C1D1 291 aa27.7■■■□□ 2.02
CIRBP-219ENST00000588411 CCER2I3L3R5 266 aa27.7■■■□□ 2.02
CIRBP-219ENST00000588411 GPR101Q96P66 508 aaPredicted RBP27.7■■■□□ 2.02
CIRBP-219ENST00000588411 PSMD14O00487 310 aa27.69■■■□□ 2.02
CIRBP-219ENST00000588411 RPS12P25398 132 aaKnown RBP27.69■■■□□ 2.02
CIRBP-219ENST00000588411 CASP7P55210 303 aa27.69■■■□□ 2.02
CIRBP-219ENST00000588411 BEND3Q5T5X7 828 aa27.69■■■□□ 2.02
CIRBP-219ENST00000588411 DPF2Q92785 391 aa27.69■■■□□ 2.02
CIRBP-219ENST00000588411 CNOT7Q9UIV1 285 aaKnown RBP27.68■■■□□ 2.02
CIRBP-219ENST00000588411 MYH3P11055 1940 aa27.68■■■□□ 2.02
CIRBP-219ENST00000588411 ITGA6P23229 1130 aa27.67■■■□□ 2.02
CIRBP-219ENST00000588411 MPHOSPH8Q99549 860 aa27.67■■■□□ 2.02
CIRBP-219ENST00000588411 MKRN1Q9UHC7 482 aaKnown RBP27.67■■■□□ 2.02
CIRBP-219ENST00000588411 FAM161AQ3B820 660 aa27.66■■■□□ 2.02
CIRBP-219ENST00000588411 MICALL2Q8IY33 904 aa27.66■■■□□ 2.02
CIRBP-219ENST00000588411 ZC3H15Q8WU90 426 aaKnown RBP27.66■■■□□ 2.02
CIRBP-219ENST00000588411 MINPP1Q9UNW1 487 aa27.66■■■□□ 2.02
CIRBP-219ENST00000588411 CSF1RP07333 972 aa27.65■■■□□ 2.02
CIRBP-219ENST00000588411 SLC4A10Q6U841 1118 aa27.65■■■□□ 2.02
CIRBP-219ENST00000588411 ZBTB12Q9Y330 459 aaPredicted RBP27.65■■■□□ 2.02
CIRBP-219ENST00000588411 CNTNAP1P78357 1384 aa27.64■■■□□ 2.02
CIRBP-219ENST00000588411 ALDH1L1O75891 902 aa27.64■■■□□ 2.02
CIRBP-219ENST00000588411 ANKRD2Q9GZV1 360 aa27.64■■■□□ 2.02
CIRBP-219ENST00000588411 ANKRD18BA2A2Z9 1011 aa27.63■■■□□ 2.01
CIRBP-219ENST00000588411 GRM8O00222 908 aa27.63■■■□□ 2.01
CIRBP-219ENST00000588411 SRCIN1Q9C0H9 1055 aa27.63■■■□□ 2.01
CIRBP-219ENST00000588411 C9orf78Q9NZ63 289 aaPredicted RBP27.63■■■□□ 2.01
CIRBP-219ENST00000588411 SLFN5Q08AF3 891 aa27.62■■■□□ 2.01
CIRBP-219ENST00000588411 IFIT5Q13325 482 aaKnown RBP27.62■■■□□ 2.01
CIRBP-219ENST00000588411 CHMP3Q9Y3E7 222 aa27.62■■■□□ 2.01
CIRBP-219ENST00000588411 MED23Q9ULK4 1368 aa27.61■■■□□ 2.01
CIRBP-219ENST00000588411 VIL1P09327 827 aaKnown RBP27.61■■■□□ 2.01
CIRBP-219ENST00000588411 CCT4P50991 539 aaKnown RBP27.61■■■□□ 2.01
CIRBP-219ENST00000588411 PODNQ7Z5L7 613 aa27.61■■■□□ 2.01
CIRBP-219ENST00000588411 TRPM4Q8TD43 1214 aa27.61■■■□□ 2.01
CIRBP-219ENST00000588411 KCNQ5Q9NR82 932 aa27.61■■■□□ 2.01
CIRBP-219ENST00000588411 PGAP2Q9UHJ9 254 aa27.61■■■□□ 2.01
CIRBP-219ENST00000588411 ABT1Q9ULW3 272 aaKnown RBP27.61■■■□□ 2.01
CIRBP-219ENST00000588411 LEMD3Q9Y2U8 911 aa27.61■■■□□ 2.01
CIRBP-219ENST00000588411 PTPRCP08575 1304 aa27.6■■■□□ 2.01
CIRBP-219ENST00000588411 MRPL50Q8N5N7 158 aaKnown RBP27.59■■■□□ 2.01
CIRBP-219ENST00000588411 SHTN1A0MZ66 631 aa27.58■■■□□ 2.01
CIRBP-219ENST00000588411 KCNJ4P48050 445 aa27.58■■■□□ 2.01
CIRBP-219ENST00000588411 HIRAP54198 1017 aaPredicted RBP27.58■■■□□ 2.01
CIRBP-219ENST00000588411 FOXO4P98177 505 aa27.58■■■□□ 2.01
CIRBP-219ENST00000588411 RASSF10A6NK89 507 aa27.57■■■□□ 2
CIRBP-219ENST00000588411 TRAF5O00463 557 aa27.57■■■□□ 2
CIRBP-219ENST00000588411 DEFB115Q30KQ5 88 aa27.57■■■□□ 2
CIRBP-219ENST00000588411 RSBN1LQ6PCB5 846 aaPredicted RBP27.57■■■□□ 2
CIRBP-219ENST00000588411 CDC37L1Q7L3B6 337 aa27.57■■■□□ 2
CIRBP-219ENST00000588411 SAMD7Q7Z3H4 446 aa27.57■■■□□ 2
CIRBP-219ENST00000588411 AGBL3Q8NEM8 1001 aa27.57■■■□□ 2
CIRBP-219ENST00000588411 USP17L3A6NCW0 530 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 USP17L4A6NCW7 530 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 CCDC57Q2TAC2 916 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 TBC1D10BQ4KMP7 808 aaPredicted RBP27.56■■■□□ 2
CIRBP-219ENST00000588411 TAF7LQ5H9L4 462 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 LMBR1LQ6UX01 489 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 USP17L1Q7RTZ2 530 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 ZNF804BA4D1E1 1349 aa27.56■■■□□ 2
CIRBP-219ENST00000588411 SPEF2Q9C093 1822 aa27.55■■■□□ 2
CIRBP-219ENST00000588411 HSPA1AP0DMV8 641 aaKnown RBP27.55■■■□□ 2
CIRBP-219ENST00000588411 HSPA1BP0DMV9 641 aaKnown RBP27.55■■■□□ 2
CIRBP-219ENST00000588411 SSH1Q8WYL5 1049 aa27.55■■■□□ 2
CIRBP-219ENST00000588411 GLIS2Q9BZE0 524 aaPredicted RBP27.55■■■□□ 2
CIRBP-219ENST00000588411 COA1Q9GZY4 146 aa27.55■■■□□ 2
CIRBP-219ENST00000588411 ZNF609O15014 1411 aa27.55■■■□□ 2
CIRBP-219ENST00000588411 VEGFBP49765 207 aa27.54■■■□□ 2
CIRBP-219ENST00000588411 CHRNDQ07001 517 aa27.54■■■□□ 2
CIRBP-219ENST00000588411 ALDH1L2Q3SY69 923 aa27.54■■■□□ 2
CIRBP-219ENST00000588411 RBM26Q5T8P6 1007 aaKnown RBP27.54■■■□□ 2
CIRBP-219ENST00000588411 CDCA7LQ96GN5 454 aa27.54■■■□□ 2
CIRBP-219ENST00000588411 CT47B1P0C2W7 299 aaPredicted RBP27.53■■■□□ 2
CIRBP-219ENST00000588411 KIF4BQ2VIQ3 1234 aa27.53■■■□□ 2
CIRBP-219ENST00000588411 SCN9AQ15858 1988 aa27.52■■■□□ 2
CIRBP-219ENST00000588411 CELF2O95319 508 aaKnown RBP27.52■■■□□ 2
CIRBP-219ENST00000588411 FMR1Q06787 632 aaKnown RBP eCLIP27.52■■■□□ 2
CIRBP-219ENST00000588411 DCPSQ96C86 337 aaKnown RBP27.52■■■□□ 2
CIRBP-219ENST00000588411 WTIPA6NIX2 430 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-219ENST00000588411 USP17L8P0C7I0 530 aa27.51■■□□□ 1.99
CIRBP-219ENST00000588411 ZNF280AP59817 542 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-219ENST00000588411 EPHA10Q5JZY3 1008 aa27.51■■□□□ 1.99
CIRBP-219ENST00000588411 CST9Q5W186 159 aa27.51■■□□□ 1.99
CIRBP-219ENST00000588411 SMC4Q9NTJ3 1288 aa27.51■■□□□ 1.99
CIRBP-219ENST00000588411 ECE1P42892 770 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms