RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 YDJCA8MPS7 323 aa24.8■■□□□ 1.56
TPM4-208ENST00000588410 ATP2B4P23634 1241 aa24.8■■□□□ 1.56
TPM4-208ENST00000588410 USP50Q70EL3 339 aaPredicted RBP24.8■■□□□ 1.56
TPM4-208ENST00000588410 CDCA7LQ96GN5 454 aa24.8■■□□□ 1.56
TPM4-208ENST00000588410 COL4A1P02462 1669 aa24.8■■□□□ 1.56
TPM4-208ENST00000588410 SCN4AP35499 1836 aa24.79■■□□□ 1.56
TPM4-208ENST00000588410 LRRC37AA6NMS7 1700 aa24.79■■□□□ 1.56
TPM4-208ENST00000588410 ECE2O60344 883 aa24.79■■□□□ 1.56
TPM4-208ENST00000588410 ITGA6P23229 1130 aa24.79■■□□□ 1.56
TPM4-208ENST00000588410 MRPL50Q8N5N7 158 aaKnown RBP24.79■■□□□ 1.56
TPM4-208ENST00000588410 KLRG1Q96E93 195 aa24.79■■□□□ 1.56
TPM4-208ENST00000588410 SRCIN1Q9C0H9 1055 aa24.79■■□□□ 1.56
TPM4-208ENST00000588410 ADARB2Q9NS39 739 aaKnown RBP24.79■■□□□ 1.56
TPM4-208ENST00000588410 C9orf78Q9NZ63 289 aaPredicted RBP24.79■■□□□ 1.56
TPM4-208ENST00000588410 ALDH1L1O75891 902 aa24.78■■□□□ 1.56
TPM4-208ENST00000588410 CSF1RP07333 972 aa24.78■■□□□ 1.56
TPM4-208ENST00000588410 FAM161AQ3B820 660 aa24.78■■□□□ 1.56
TPM4-208ENST00000588410 MAP1SQ66K74 1059 aaPredicted RBP24.78■■□□□ 1.56
TPM4-208ENST00000588410 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
TPM4-208ENST00000588410 CNTROBQ8N137 903 aa24.78■■□□□ 1.56
TPM4-208ENST00000588410 MPHOSPH8Q99549 860 aa24.78■■□□□ 1.56
TPM4-208ENST00000588410 GRM8O00222 908 aa24.77■■□□□ 1.56
TPM4-208ENST00000588410 MINPP1Q9UNW1 487 aa24.77■■□□□ 1.56
TPM4-208ENST00000588410 CHMP3Q9Y3E7 222 aa24.77■■□□□ 1.56
TPM4-208ENST00000588410 TAF1P21675 1872 aa24.77■■□□□ 1.56
TPM4-208ENST00000588410 CEP350Q5VT06 3117 aa24.76■■□□□ 1.55
TPM4-208ENST00000588410 ANKRD18BA2A2Z9 1011 aa24.76■■□□□ 1.55
TPM4-208ENST00000588410 PSMD14O00487 310 aa24.76■■□□□ 1.55
TPM4-208ENST00000588410 SSH1Q8WYL5 1049 aa24.76■■□□□ 1.55
TPM4-208ENST00000588410 CREBZFQ9NS37 354 aa24.76■■□□□ 1.55
TPM4-208ENST00000588410 H7C1D1 291 aa24.75■■□□□ 1.55
TPM4-208ENST00000588410 ITGBL1O95965 494 aaPredicted RBP24.75■■□□□ 1.55
TPM4-208ENST00000588410 PTPRCP08575 1304 aa24.75■■□□□ 1.55
TPM4-208ENST00000588410 PASKQ96RG2 1323 aa24.75■■□□□ 1.55
TPM4-208ENST00000588410 IFIT5Q13325 482 aaKnown RBP24.74■■□□□ 1.55
TPM4-208ENST00000588410 CNOT7Q9UIV1 285 aaKnown RBP24.74■■□□□ 1.55
TPM4-208ENST00000588410 ZBTB12Q9Y330 459 aaPredicted RBP24.74■■□□□ 1.55
TPM4-208ENST00000588410 FOXO4P98177 505 aa24.73■■□□□ 1.55
TPM4-208ENST00000588410 ALDH1L2Q3SY69 923 aa24.73■■□□□ 1.55
TPM4-208ENST00000588410 ANKRD2Q9GZV1 360 aa24.73■■□□□ 1.55
TPM4-208ENST00000588410 SMC4Q9NTJ3 1288 aa24.73■■□□□ 1.55
TPM4-208ENST00000588410 RPS12P25398 132 aaKnown RBP24.72■■□□□ 1.55
TPM4-208ENST00000588410 CCT4P50991 539 aaKnown RBP24.72■■□□□ 1.55
TPM4-208ENST00000588410 LMBR1LQ6UX01 489 aa24.72■■□□□ 1.55
TPM4-208ENST00000588410 MICALL2Q8IY33 904 aa24.72■■□□□ 1.55
TPM4-208ENST00000588410 TRMT2AQ8IZ69 625 aaKnown RBP24.72■■□□□ 1.55
TPM4-208ENST00000588410 MIER1Q8N108 512 aa24.72■■□□□ 1.55
TPM4-208ENST00000588410 DPF2Q92785 391 aa24.72■■□□□ 1.55
TPM4-208ENST00000588410 KCNQ5Q9NR82 932 aa24.72■■□□□ 1.55
TPM4-208ENST00000588410 TMEM88BA6NKF7 163 aa24.71■■□□□ 1.55
TPM4-208ENST00000588410 CT47B1P0C2W7 299 aaPredicted RBP24.71■■□□□ 1.55
TPM4-208ENST00000588410 LEMD3Q9Y2U8 911 aa24.71■■□□□ 1.55
TPM4-208ENST00000588410 CCDC57Q2TAC2 916 aa24.7■■□□□ 1.54
TPM4-208ENST00000588410 TAF7LQ5H9L4 462 aa24.7■■□□□ 1.54
TPM4-208ENST00000588410 LTBP1Q14766 1721 aa24.69■■□□□ 1.54
TPM4-208ENST00000588410 KCNJ4P48050 445 aa24.69■■□□□ 1.54
TPM4-208ENST00000588410 MED23Q9ULK4 1368 aa24.68■■□□□ 1.54
TPM4-208ENST00000588410 CACNA1FO60840 1977 aa24.68■■□□□ 1.54
TPM4-208ENST00000588410 VIL1P09327 827 aaKnown RBP24.68■■□□□ 1.54
TPM4-208ENST00000588410 EPHA10Q5JZY3 1008 aa24.68■■□□□ 1.54
TPM4-208ENST00000588410 PODNQ7Z5L7 613 aa24.68■■□□□ 1.54
TPM4-208ENST00000588410 JMYQ8N9B5 988 aa24.68■■□□□ 1.54
TPM4-208ENST00000588410 ZNF804BA4D1E1 1349 aa24.67■■□□□ 1.54
TPM4-208ENST00000588410 SHTN1A0MZ66 631 aa24.67■■□□□ 1.54
TPM4-208ENST00000588410 WTIPA6NIX2 430 aaPredicted RBP24.67■■□□□ 1.54
TPM4-208ENST00000588410 CHRNDQ07001 517 aa24.67■■□□□ 1.54
TPM4-208ENST00000588410 TRPM4Q8TD43 1214 aa24.67■■□□□ 1.54
TPM4-208ENST00000588410 ZC3H15Q8WU90 426 aaKnown RBP24.67■■□□□ 1.54
TPM4-208ENST00000588410 MKRN1Q9UHC7 482 aaKnown RBP24.67■■□□□ 1.54
TPM4-208ENST00000588410 SUCLG2Q96I99 432 aa24.66■■□□□ 1.54
TPM4-208ENST00000588410 ADAMTSL1Q8N6G6 1762 aa24.66■■□□□ 1.54
TPM4-208ENST00000588410 USP17L3A6NCW0 530 aa24.65■■□□□ 1.54
TPM4-208ENST00000588410 USP17L4A6NCW7 530 aa24.65■■□□□ 1.54
TPM4-208ENST00000588410 NBPF7P0C2Y1 421 aaPredicted RBP24.65■■□□□ 1.54
TPM4-208ENST00000588410 HIRAP54198 1017 aaPredicted RBP24.65■■□□□ 1.54
TPM4-208ENST00000588410 RSBN1LQ6PCB5 846 aaPredicted RBP24.65■■□□□ 1.54
TPM4-208ENST00000588410 USP17L1Q7RTZ2 530 aa24.65■■□□□ 1.54
TPM4-208ENST00000588410 SAMD7Q7Z3H4 446 aa24.65■■□□□ 1.54
TPM4-208ENST00000588410 COA1Q9GZY4 146 aa24.65■■□□□ 1.54
TPM4-208ENST00000588410 TBC1D10BQ4KMP7 808 aaPredicted RBP24.64■■□□□ 1.54
TPM4-208ENST00000588410 RBM26Q5T8P6 1007 aaKnown RBP24.64■■□□□ 1.54
TPM4-208ENST00000588410 LDHAL6AQ6ZMR3 332 aa24.64■■□□□ 1.54
TPM4-208ENST00000588410 AGBL3Q8NEM8 1001 aa24.64■■□□□ 1.54
TPM4-208ENST00000588410 CNNM1Q9NRU3 951 aa24.64■■□□□ 1.54
TPM4-208ENST00000588410 PGAP2Q9UHJ9 254 aa24.64■■□□□ 1.54
TPM4-208ENST00000588410 UTYO14607 1347 aa24.63■■□□□ 1.53
TPM4-208ENST00000588410 FBXW7Q969H0 707 aa24.63■■□□□ 1.53
TPM4-208ENST00000588410 ZNF594Q96JF6 807 aaPredicted RBP24.63■■□□□ 1.53
TPM4-208ENST00000588410 ABT1Q9ULW3 272 aaKnown RBP24.63■■□□□ 1.53
TPM4-208ENST00000588410 TRAF5O00463 557 aa24.62■■□□□ 1.53
TPM4-208ENST00000588410 HELBQ8NG08 1087 aaPredicted RBP24.62■■□□□ 1.53
TPM4-208ENST00000588410 TAF5LO75529 589 aa24.61■■□□□ 1.53
TPM4-208ENST00000588410 CDC37L1Q7L3B6 337 aa24.61■■□□□ 1.53
TPM4-208ENST00000588410 GLIS2Q9BZE0 524 aaPredicted RBP24.61■■□□□ 1.53
TPM4-208ENST00000588410 NOB1Q9ULX3 412 aaKnown RBP24.61■■□□□ 1.53
TPM4-208ENST00000588410 CNTNAP1P78357 1384 aa24.61■■□□□ 1.53
TPM4-208ENST00000588410 FMR1Q06787 632 aaKnown RBP eCLIP24.6■■□□□ 1.53
TPM4-208ENST00000588410 KIF4BQ2VIQ3 1234 aa24.6■■□□□ 1.53
TPM4-208ENST00000588410 TXNRD3Q86VQ6 643 aa24.6■■□□□ 1.53
TPM4-208ENST00000588410 KAZALD1Q96I82 304 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms