RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 AMIGO3Q86WK7 504 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 PLCD3Q8N3E9 789 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 STK32BQ9NY57 414 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 EP400Q96L91 3159 aa12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 ATP5JP18859 108 aa12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 PI4K2BQ8TCG2 481 aa12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 RILPL2Q969X0 211 aa12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 NEUROD6Q96NK8 337 aa12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 PUS3Q9BZE2 481 aaKnown RBP12.81□□□□□ -0.36
CHMP1B-202ENST00000588284 SCN7AQ01118 1682 aa12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 SERPINB2P05120 415 aa12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 ST5P78524 1137 aa12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 COL23A1Q86Y22 540 aaPredicted RBP12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 ANKRD18AQ8IVF6 992 aa12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
CHMP1B-202ENST00000588284 UBR3Q6ZT12 1888 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 PDE8BO95263 885 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 ANP32AP39687 249 aaKnown RBP12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 TIMM10P62072 90 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 SLC15A2Q16348 729 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 ZNF827Q17R98 1081 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 TBC1D9Q6ZT07 1266 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
CHMP1B-202ENST00000588284 A0A1B0GUL7 405 aa12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 HIP1O00291 1037 aa12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 TSHZ3Q63HK5 1081 aa12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 MYH3P11055 1940 aa12.78□□□□□ -0.36
CHMP1B-202ENST00000588284 SEC24BO95487 1268 aa12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 ATP2B3Q16720 1220 aa12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 LPIN2Q92539 896 aa12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 RIC1Q4ADV7 1423 aa12.77□□□□□ -0.37
CHMP1B-202ENST00000588284 REC8O95072 547 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 CHMLP26374 656 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 MFAP1P55081 439 aaKnown RBP12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 PUM3Q15397 648 aaKnown RBP12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 PRR5LQ6MZQ0 368 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 XAGE2Q96GT9 111 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 ANKRD2Q9GZV1 360 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 BOLA2Q9H3K6 86 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
CHMP1B-202ENST00000588284 POLRMTO00411 1230 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 EPB41L2O43491 1005 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 IFIT1P09914 478 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 SLC5A1P13866 664 aa12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 LRRFIP1Q32MZ4 808 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 PNPLA7Q6ZV29 1317 aa12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 ZNF512BQ96KM6 892 aaPredicted RBP12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 HAUS7Q99871 368 aa12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 C22orf23Q9BZE7 217 aa12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 TLR7Q9NYK1 1049 aaKnown RBP12.75□□□□□ -0.37
CHMP1B-202ENST00000588284 LAMB2P55268 1798 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 UQCRFS1P1P0C7P4 283 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 FGFR2P21802 821 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 UBE4AQ14139 1066 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 BRIP1Q9BX63 1249 aa12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
CHMP1B-202ENST00000588284 ZNF609O15014 1411 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 KLRG2A4D1S0 409 aaPredicted RBP12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 BBOX1O75936 387 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 CHRNDQ07001 517 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 DDR1Q08345 913 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 GRAPQ13588 217 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 GRAPLQ8TC17 118 aaPredicted RBP12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 SLC16A10Q8TF71 515 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 ESYT1Q9BSJ8 1104 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 MINPP1Q9UNW1 487 aa12.73□□□□□ -0.37
CHMP1B-202ENST00000588284 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
CHMP1B-202ENST00000588284 PDE6BP35913 854 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms