RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 CEBPAP49715 358 aaPredicted RBP19.67■□□□□ 0.74
SSC5D-203ENST00000588254 DNAI1Q9UI46 699 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
SSC5D-203ENST00000588254 PLEKHG3A1L390 1219 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 NYAP1Q6ZVC0 841 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 CEP57L1Q8IYX8 460 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 KAZALD1Q96I82 304 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 KDRP35968 1356 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 ERBB3P21860 1342 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
SSC5D-203ENST00000588254 NEK11Q8NG66 645 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 IRX5P78411 483 aaPredicted RBP19.65■□□□□ 0.74
SSC5D-203ENST00000588254 EPHA10Q5JZY3 1008 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 RIC3Q7Z5B4 369 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 ERO1AQ96HE7 468 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 AMOTL2Q9Y2J4 779 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 ITSN1Q15811 1721 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
SSC5D-203ENST00000588254 COL15A1P39059 1388 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 GRM8O00222 908 aa19.65■□□□□ 0.74
SSC5D-203ENST00000588254 E4F1Q66K89 784 aaPredicted RBP19.65■□□□□ 0.74
SSC5D-203ENST00000588254 RBM43Q6ZSC3 357 aaKnown RBP19.65■□□□□ 0.74
SSC5D-203ENST00000588254 NOL10Q9BSC4 688 aaKnown RBP19.65■□□□□ 0.74
SSC5D-203ENST00000588254 ZCCHC17Q9NP64 241 aaKnown RBP19.65■□□□□ 0.74
SSC5D-203ENST00000588254 MON2Q7Z3U7 1717 aa19.64■□□□□ 0.74
SSC5D-203ENST00000588254 STOX1Q6ZVD7 989 aa19.64■□□□□ 0.73
SSC5D-203ENST00000588254 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
SSC5D-203ENST00000588254 CLCN6P51797 869 aa19.64■□□□□ 0.73
SSC5D-203ENST00000588254 GNL2Q13823 731 aaKnown RBP19.64■□□□□ 0.73
SSC5D-203ENST00000588254 ERC1Q8IUD2 1116 aa19.64■□□□□ 0.73
SSC5D-203ENST00000588254 CCDC34Q96HJ3 373 aa19.64■□□□□ 0.73
SSC5D-203ENST00000588254 NEUROD6Q96NK8 337 aa19.64■□□□□ 0.73
SSC5D-203ENST00000588254 NRKQ7Z2Y5 1582 aa19.64■□□□□ 0.73
SSC5D-203ENST00000588254 URI1O94763 535 aaPredicted RBP19.63■□□□□ 0.73
SSC5D-203ENST00000588254 MRFAP1L1Q96HT8 127 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 PPP1R13BQ96KQ4 1090 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 ANO10Q9NW15 660 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 DBF4Q9UBU7 674 aaPredicted RBP19.63■□□□□ 0.73
SSC5D-203ENST00000588254 ATP1A3P13637 1013 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 GYS2P54840 703 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 HAND2P61296 217 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 HSP90AB3PQ58FF7 597 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
SSC5D-203ENST00000588254 SFPQP23246 707 aaKnown RBP eCLIP19.62■□□□□ 0.73
SSC5D-203ENST00000588254 NDUFA8P51970 172 aa19.62■□□□□ 0.73
SSC5D-203ENST00000588254 TFCP2Q12800 502 aa19.62■□□□□ 0.73
SSC5D-203ENST00000588254 ARMCX5Q6P1M9 558 aa19.62■□□□□ 0.73
SSC5D-203ENST00000588254 ZSWIM4Q9H7M6 989 aa19.62■□□□□ 0.73
SSC5D-203ENST00000588254 DBNDD2Q9BQY9 259 aa19.62■□□□□ 0.73
SSC5D-203ENST00000588254 DBNLQ9UJU6 430 aaKnown RBP19.62■□□□□ 0.73
SSC5D-203ENST00000588254 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
SSC5D-203ENST00000588254 KCNB2Q92953 911 aa19.62■□□□□ 0.73
SSC5D-203ENST00000588254 USP31Q70CQ4 1352 aa19.61■□□□□ 0.73
SSC5D-203ENST00000588254 ATP5J2-PTCD1G3V325 749 aa19.61■□□□□ 0.73
SSC5D-203ENST00000588254 PTCD1O75127 700 aaKnown RBP19.61■□□□□ 0.73
SSC5D-203ENST00000588254 MARCKSP29966 332 aaPredicted RBP19.61■□□□□ 0.73
SSC5D-203ENST00000588254 ADD1P35611 737 aaKnown RBP19.61■□□□□ 0.73
SSC5D-203ENST00000588254 KSR2Q6VAB6 950 aa19.61■□□□□ 0.73
SSC5D-203ENST00000588254 NSUN7Q8NE18 718 aaKnown RBP19.61■□□□□ 0.73
SSC5D-203ENST00000588254 MYD88Q99836 296 aa19.61■□□□□ 0.73
SSC5D-203ENST00000588254 USP42Q9H9J4 1324 aaKnown RBP19.61■□□□□ 0.73
SSC5D-203ENST00000588254 CCDC66A2RUB6 948 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 HIP1O00291 1037 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 CTDNEP1O95476 244 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 TTLL5Q6EMB2 1281 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 PCDHA7Q9UN72 937 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 STK38Q15208 465 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 SYCP1Q15431 976 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 TIGD1Q96MW7 591 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 NEO1Q92859 1461 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 GOLIM4O00461 696 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 FAM160A1Q05DH4 1040 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 MNS1Q8NEH6 495 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 CLIC4Q9Y696 253 aa19.6■□□□□ 0.73
SSC5D-203ENST00000588254 CARD6Q9BX69 1037 aa19.59■□□□□ 0.73
SSC5D-203ENST00000588254 HDGFP51858 240 aaKnown RBP19.58■□□□□ 0.73
SSC5D-203ENST00000588254 UBXN4Q92575 508 aa19.58■□□□□ 0.73
SSC5D-203ENST00000588254 UTP14AQ9BVJ6 771 aaKnown RBP19.58■□□□□ 0.72
SSC5D-203ENST00000588254 ZSCAN16Q9H4T2 348 aaPredicted RBP19.58■□□□□ 0.72
SSC5D-203ENST00000588254 CDC25BP30305 580 aa19.57■□□□□ 0.72
SSC5D-203ENST00000588254 HNRNPH2P55795 449 aaKnown RBP19.57■□□□□ 0.72
SSC5D-203ENST00000588254 SARM1Q6SZW1 724 aa19.57■□□□□ 0.72
SSC5D-203ENST00000588254 UBE3BQ7Z3V4 1068 aa19.57■□□□□ 0.72
SSC5D-203ENST00000588254 PNMA6AP0CW24 399 aaPredicted RBP19.57■□□□□ 0.72
SSC5D-203ENST00000588254 PDILTQ8N807 584 aa19.57■□□□□ 0.72
SSC5D-203ENST00000588254 MRPS27Q92552 414 aaKnown RBP19.57■□□□□ 0.72
SSC5D-203ENST00000588254 MED23Q9ULK4 1368 aa19.57■□□□□ 0.72
SSC5D-203ENST00000588254 C1orf141Q5JVX7 400 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 ILDR1Q86SU0 546 aaPredicted RBP19.56■□□□□ 0.72
SSC5D-203ENST00000588254 DPF2Q92785 391 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 NAT10Q9H0A0 1025 aaKnown RBP19.56■□□□□ 0.72
SSC5D-203ENST00000588254 NEMFO60524 1076 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 IGKV5-2P06315 115 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 RXRAP19793 462 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 ST5P78524 1137 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 TEX35Q5T0J7 233 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 RCOR1Q9UKL0 485 aa19.56■□□□□ 0.72
SSC5D-203ENST00000588254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.56■□□□□ 0.72
SSC5D-203ENST00000588254 FHOD1Q9Y613 1164 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms