RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 SPATA32Q96LK8 384 aa23.45■■□□□ 1.34
MBD1-216ENST00000587605 FBXO3Q9UK99 471 aa23.45■■□□□ 1.34
MBD1-216ENST00000587605 CHMP3Q9Y3E7 222 aa23.45■■□□□ 1.34
MBD1-216ENST00000587605 TNS2Q63HR2 1409 aa23.44■■□□□ 1.34
MBD1-216ENST00000587605 EYA2O00167 538 aa23.44■■□□□ 1.34
MBD1-216ENST00000587605 DDX46Q7L014 1031 aaKnown RBP23.44■■□□□ 1.34
MBD1-216ENST00000587605 HSP90B1P14625 803 aaKnown RBP23.43■■□□□ 1.34
MBD1-216ENST00000587605 ZMYM1Q5SVZ6 1142 aa23.43■■□□□ 1.34
MBD1-216ENST00000587605 PFKFB2O60825 505 aa23.43■■□□□ 1.34
MBD1-216ENST00000587605 COL9A3Q14050 684 aaPredicted RBP23.43■■□□□ 1.34
MBD1-216ENST00000587605 DHX32Q7L7V1 743 aaKnown RBP23.43■■□□□ 1.34
MBD1-216ENST00000587605 FERMT3Q86UX7 667 aa23.43■■□□□ 1.34
MBD1-216ENST00000587605 LEO1Q8WVC0 666 aaPredicted RBP23.43■■□□□ 1.34
MBD1-216ENST00000587605 HMGN5P82970 282 aaKnown RBP23.42■■□□□ 1.34
MBD1-216ENST00000587605 STK3Q13188 491 aa23.42■■□□□ 1.34
MBD1-216ENST00000587605 SMARCC2Q8TAQ2 1214 aa23.42■■□□□ 1.34
MBD1-216ENST00000587605 CCDC129Q6ZRS4 1044 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 TTLL7Q6ZT98 887 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 FAM200AQ8TCP9 573 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 NEUROD6Q96NK8 337 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 CFAP45Q9UL16 551 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 R3HCC1Q9Y3T6 440 aaKnown RBP23.41■■□□□ 1.34
MBD1-216ENST00000587605 LAMA4Q16363 1823 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 RESTQ13127 1097 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 HSP90AA2PQ14568 343 aaPredicted RBP23.41■■□□□ 1.34
MBD1-216ENST00000587605 NAA16Q6N069 864 aaPredicted RBP23.41■■□□□ 1.34
MBD1-216ENST00000587605 TOM1L2Q6ZVM7 507 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 PRDM11Q9NQV5 511 aa23.41■■□□□ 1.34
MBD1-216ENST00000587605 COL5A2P05997 1499 aaPredicted RBP23.41■■□□□ 1.34
MBD1-216ENST00000587605 H3BQV1 296 aa23.4■■□□□ 1.34
MBD1-216ENST00000587605 GOLIM4O00461 696 aa23.4■■□□□ 1.34
MBD1-216ENST00000587605 FGD1P98174 961 aa23.4■■□□□ 1.34
MBD1-216ENST00000587605 IFFO2Q5TF58 517 aa23.4■■□□□ 1.34
MBD1-216ENST00000587605 RBM43Q6ZSC3 357 aaKnown RBP23.4■■□□□ 1.34
MBD1-216ENST00000587605 PIBF1Q8WXW3 757 aa23.4■■□□□ 1.34
MBD1-216ENST00000587605 SEC62Q99442 399 aaKnown RBP23.4■■□□□ 1.34
MBD1-216ENST00000587605 AGXT2Q9BYV1 514 aa23.4■■□□□ 1.34
MBD1-216ENST00000587605 GOLGA6L6A8MZA4 724 aa23.39■■□□□ 1.34
MBD1-216ENST00000587605 ATL3Q6DD88 541 aa23.39■■□□□ 1.34
MBD1-216ENST00000587605 SASS6Q6UVJ0 657 aa23.39■■□□□ 1.34
MBD1-216ENST00000587605 BRF1Q92994 677 aa23.39■■□□□ 1.34
MBD1-216ENST00000587605 CARD10Q9BWT7 1032 aa23.39■■□□□ 1.34
MBD1-216ENST00000587605 ABCC12Q96J65 1359 aa23.39■■□□□ 1.33
MBD1-216ENST00000587605 RNF113AO15541 343 aaKnown RBP23.39■■□□□ 1.33
MBD1-216ENST00000587605 IFIT1P09914 478 aaKnown RBP23.39■■□□□ 1.33
MBD1-216ENST00000587605 TNMDQ9H2S6 317 aa23.39■■□□□ 1.33
MBD1-216ENST00000587605 CLSTN2Q9H4D0 955 aa23.39■■□□□ 1.33
MBD1-216ENST00000587605 CAVIN2O95810 425 aa23.38■■□□□ 1.33
MBD1-216ENST00000587605 IL2RBP14784 551 aa23.38■■□□□ 1.33
MBD1-216ENST00000587605 LIG1P18858 919 aa23.38■■□□□ 1.33
MBD1-216ENST00000587605 TPRNQ4KMQ1 711 aa23.38■■□□□ 1.33
MBD1-216ENST00000587605 AKAP2Q9Y2D5 859 aa23.38■■□□□ 1.33
MBD1-216ENST00000587605 NDUFB9Q9Y6M9 179 aa23.38■■□□□ 1.33
MBD1-216ENST00000587605 JAK2O60674 1132 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 EXOSC10Q01780 885 aaKnown RBP23.37■■□□□ 1.33
MBD1-216ENST00000587605 TYRO3Q06418 890 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 TRIM28Q13263 835 aaKnown RBP23.37■■□□□ 1.33
MBD1-216ENST00000587605 FBXL16Q8N461 479 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 ISCA1Q9BUE6 129 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 SHANK3Q9BYB0 1731 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 A1BGP04217 495 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
MBD1-216ENST00000587605 MYH15Q9Y2K3 1946 aa23.36■■□□□ 1.33
MBD1-216ENST00000587605 ZFYP08048 801 aaPredicted RBP23.36■■□□□ 1.33
MBD1-216ENST00000587605 SCRN1Q12765 414 aa23.36■■□□□ 1.33
MBD1-216ENST00000587605 STOX1Q6ZVD7 989 aa23.36■■□□□ 1.33
MBD1-216ENST00000587605 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
MBD1-216ENST00000587605 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
MBD1-216ENST00000587605 DACT1Q9NYF0 836 aa23.36■■□□□ 1.33
MBD1-216ENST00000587605 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
MBD1-216ENST00000587605 A0A1B0GUL7 405 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 FAM173BQ6P4H8 233 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 ZNF274Q96GC6 653 aaPredicted RBP23.35■■□□□ 1.33
MBD1-216ENST00000587605 CTNNA3Q9UI47 895 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 DTNBO60941 627 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 HSPD1P10809 573 aaKnown RBP23.35■■□□□ 1.33
MBD1-216ENST00000587605 TIMM10P62072 90 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 PLA2G12BQ9BX93 195 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 MRVI1Q9Y6F6 885 aa23.35■■□□□ 1.33
MBD1-216ENST00000587605 CCDC158Q5M9N0 1113 aa23.34■■□□□ 1.33
MBD1-216ENST00000587605 NSUN7Q8NE18 718 aaKnown RBP23.34■■□□□ 1.33
MBD1-216ENST00000587605 TFIP11Q9UBB9 837 aaKnown RBP23.34■■□□□ 1.33
MBD1-216ENST00000587605 MAST3O60307 1309 aa23.34■■□□□ 1.33
MBD1-216ENST00000587605 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
MBD1-216ENST00000587605 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
MBD1-216ENST00000587605 DYNC1I1O14576 645 aa23.33■■□□□ 1.33
MBD1-216ENST00000587605 TCIRG1Q13488 830 aa23.33■■□□□ 1.33
MBD1-216ENST00000587605 CCDC57Q2TAC2 916 aa23.33■■□□□ 1.33
MBD1-216ENST00000587605 LRRC24Q50LG9 513 aa23.33■■□□□ 1.33
MBD1-216ENST00000587605 BICD2Q8TD16 824 aa23.33■■□□□ 1.33
MBD1-216ENST00000587605 SPTLC3Q9NUV7 552 aa23.33■■□□□ 1.33
MBD1-216ENST00000587605 E7EWF7 191 aa23.33■■□□□ 1.32
MBD1-216ENST00000587605 MAP7D2Q96T17 732 aa23.33■■□□□ 1.32
MBD1-216ENST00000587605 CTAGE5O15320 804 aa23.32■■□□□ 1.32
MBD1-216ENST00000587605 VSIG10Q8N0Z9 540 aa23.32■■□□□ 1.32
MBD1-216ENST00000587605 ZNF396Q96N95 335 aaPredicted RBP23.32■■□□□ 1.32
MBD1-216ENST00000587605 UQCRHLA0A096LP55 91 aa23.31■■□□□ 1.32
MBD1-216ENST00000587605 CHGBP05060 677 aa23.31■■□□□ 1.32
MBD1-216ENST00000587605 PCCAP05165 728 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms