RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
TPM4-205ENST00000586833 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
TPM4-205ENST00000586833 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
TPM4-205ENST00000586833 TBC1D16Q8TBP0 767 aa17.63■□□□□ 0.41
TPM4-205ENST00000586833 ZNF526Q8TF50 670 aaPredicted RBP17.63■□□□□ 0.41
TPM4-205ENST00000586833 MINPP1Q9UNW1 487 aa17.63■□□□□ 0.41
TPM4-205ENST00000586833 LEMD3Q9Y2U8 911 aa17.63■□□□□ 0.41
TPM4-205ENST00000586833 AOC3Q16853 763 aa17.62■□□□□ 0.41
TPM4-205ENST00000586833 SNED1Q8TER0 1413 aa17.62■□□□□ 0.41
TPM4-205ENST00000586833 PRELPP51888 382 aa17.61■□□□□ 0.41
TPM4-205ENST00000586833 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
TPM4-205ENST00000586833 MEIS3Q99687 375 aa17.61■□□□□ 0.41
TPM4-205ENST00000586833 ZNRF3Q9ULT6 936 aa17.61■□□□□ 0.41
TPM4-205ENST00000586833 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
TPM4-205ENST00000586833 GOLGB1Q14789 3259 aaKnown RBP17.61■□□□□ 0.41
TPM4-205ENST00000586833 FZD9O00144 591 aa17.6■□□□□ 0.41
TPM4-205ENST00000586833 ANKRD44Q8N8A2 993 aa17.6■□□□□ 0.41
TPM4-205ENST00000586833 KAZALD1Q96I82 304 aa17.6■□□□□ 0.41
TPM4-205ENST00000586833 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
TPM4-205ENST00000586833 IQCA1LA6NCM1 817 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 CHRNDQ07001 517 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 TNIP1Q15025 636 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 POLLQ9UGP5 575 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 UTRNP46939 3433 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 CHD4Q14839 1912 aa17.59■□□□□ 0.41
TPM4-205ENST00000586833 ZNF804BA4D1E1 1349 aa17.58■□□□□ 0.4
TPM4-205ENST00000586833 RIMBP2O15034 1052 aa17.58■□□□□ 0.4
TPM4-205ENST00000586833 GPC2Q8N158 579 aa17.58■□□□□ 0.4
TPM4-205ENST00000586833 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
TPM4-205ENST00000586833 VEGFAP15692 232 aaPredicted RBP17.57■□□□□ 0.4
TPM4-205ENST00000586833 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
TPM4-205ENST00000586833 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
TPM4-205ENST00000586833 MED23Q9ULK4 1368 aa17.56■□□□□ 0.4
TPM4-205ENST00000586833 LMOD1P29536 600 aaPredicted RBP17.56■□□□□ 0.4
TPM4-205ENST00000586833 METTL24Q5JXM2 366 aa17.56■□□□□ 0.4
TPM4-205ENST00000586833 CIAPIN1Q6FI81 312 aa17.56■□□□□ 0.4
TPM4-205ENST00000586833 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
TPM4-205ENST00000586833 GJA3Q9Y6H8 435 aa17.56■□□□□ 0.4
TPM4-205ENST00000586833 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
TPM4-205ENST00000586833 SRGAP3O43295 1099 aa17.55■□□□□ 0.4
TPM4-205ENST00000586833 PLIN1O60240 522 aa17.55■□□□□ 0.4
TPM4-205ENST00000586833 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
TPM4-205ENST00000586833 PODNQ7Z5L7 613 aa17.55■□□□□ 0.4
TPM4-205ENST00000586833 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
TPM4-205ENST00000586833 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
TPM4-205ENST00000586833 EYA2O00167 538 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 ECE2O60344 883 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 CIAO1O76071 339 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
TPM4-205ENST00000586833 MTX1Q13505 466 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 UBE4AQ14139 1066 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 RRAGCQ9HB90 399 aa17.54■□□□□ 0.4
TPM4-205ENST00000586833 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
TPM4-205ENST00000586833 CACNA1SQ13698 1873 aa17.53■□□□□ 0.4
TPM4-205ENST00000586833 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
TPM4-205ENST00000586833 RLBP1P12271 317 aa17.53■□□□□ 0.4
TPM4-205ENST00000586833 IL15P40933 162 aaPredicted RBP17.53■□□□□ 0.4
TPM4-205ENST00000586833 DOK7Q18PE1 504 aa17.53■□□□□ 0.4
TPM4-205ENST00000586833 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
TPM4-205ENST00000586833 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
TPM4-205ENST00000586833 LRRC37AA6NMS7 1700 aa17.52■□□□□ 0.4
TPM4-205ENST00000586833 TAF5LO75529 589 aa17.52■□□□□ 0.4
TPM4-205ENST00000586833 PTPN12Q05209 780 aaKnown RBP17.52■□□□□ 0.4
TPM4-205ENST00000586833 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
TPM4-205ENST00000586833 NMRK2Q9NPI5 230 aa17.52■□□□□ 0.4
TPM4-205ENST00000586833 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
TPM4-205ENST00000586833 HACL1Q9UJ83 578 aa17.52■□□□□ 0.4
TPM4-205ENST00000586833 RIPOR2Q9Y4F9 1068 aa17.52■□□□□ 0.4
TPM4-205ENST00000586833 RAD17O75943 681 aa17.51■□□□□ 0.39
TPM4-205ENST00000586833 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
TPM4-205ENST00000586833 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
TPM4-205ENST00000586833 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
TPM4-205ENST00000586833 CXCL9Q07325 125 aa17.51■□□□□ 0.39
TPM4-205ENST00000586833 CAVIN4Q5BKX8 364 aa17.51■□□□□ 0.39
TPM4-205ENST00000586833 C15orf52Q6ZUT6 534 aaKnown RBP17.51■□□□□ 0.39
TPM4-205ENST00000586833 VPS37DQ86XT2 251 aa17.51■□□□□ 0.39
TPM4-205ENST00000586833 GPR101Q96P66 508 aaPredicted RBP17.51■□□□□ 0.39
TPM4-205ENST00000586833 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
TPM4-205ENST00000586833 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
TPM4-205ENST00000586833 TOMM70O94826 608 aa17.5■□□□□ 0.39
TPM4-205ENST00000586833 PDE8BO95263 885 aa17.5■□□□□ 0.39
TPM4-205ENST00000586833 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.395e-7■□□□□ 11.1
TPM4-205ENST00000586833 PUM3Q15397 648 aaKnown RBP17.5■□□□□ 0.39
TPM4-205ENST00000586833 LRRC24Q50LG9 513 aa17.5■□□□□ 0.39
TPM4-205ENST00000586833 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
TPM4-205ENST00000586833 PUS3Q9BZE2 481 aaKnown RBP17.5■□□□□ 0.39
TPM4-205ENST00000586833 SIL1Q9H173 461 aa17.5■□□□□ 0.39
TPM4-205ENST00000586833 DUOX1Q9NRD9 1551 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 KIF3CO14782 793 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 HMMRO75330 724 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 SLC5A1P13866 664 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 RRP1P56182 461 aaKnown RBP17.49■□□□□ 0.39
TPM4-205ENST00000586833 ATP8B2P98198 1209 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 AKAP2Q9Y2D5 859 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 MYH3P11055 1940 aa17.49■□□□□ 0.39
TPM4-205ENST00000586833 USP17L3A6NCW0 530 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms