RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 VGLL2Q8N8G2 317 aa26.85■■□□□ 1.89
CIRBP-208ENST00000586548 KCNB2Q92953 911 aa26.85■■□□□ 1.89
CIRBP-208ENST00000586548 CCDC152Q4G0S7 254 aa26.84■■□□□ 1.89
CIRBP-208ENST00000586548 GORABQ5T7V8 394 aa26.84■■□□□ 1.89
CIRBP-208ENST00000586548 DDX46Q7L014 1031 aaKnown RBP26.84■■□□□ 1.89
CIRBP-208ENST00000586548 MAP4K1Q92918 833 aa26.84■■□□□ 1.89
CIRBP-208ENST00000586548 NARFQ9UHQ1 456 aa26.84■■□□□ 1.89
CIRBP-208ENST00000586548 FRAT2O75474 233 aaPredicted RBP26.83■■□□□ 1.89
CIRBP-208ENST00000586548 ADORA1P30542 326 aa26.83■■□□□ 1.89
CIRBP-208ENST00000586548 TTC39AQ5SRH9 613 aa26.83■■□□□ 1.89
CIRBP-208ENST00000586548 BCL11BQ9C0K0 894 aaPredicted RBP26.83■■□□□ 1.89
CIRBP-208ENST00000586548 GOLIM4O00461 696 aa26.82■■□□□ 1.88
CIRBP-208ENST00000586548 MROH5Q6ZUA9 1318 aa26.82■■□□□ 1.88
CIRBP-208ENST00000586548 C4BP0C0L5 1744 aa26.82■■□□□ 1.88
CIRBP-208ENST00000586548 GNPATO15228 680 aa26.82■■□□□ 1.88
CIRBP-208ENST00000586548 ARAP2Q8WZ64 1704 aa26.81■■□□□ 1.88
CIRBP-208ENST00000586548 NECTIN1Q15223 517 aa26.81■■□□□ 1.88
CIRBP-208ENST00000586548 RASEFQ8IZ41 740 aa26.81■■□□□ 1.88
CIRBP-208ENST00000586548 RTCBQ9Y3I0 505 aaKnown RBP26.81■■□□□ 1.88
CIRBP-208ENST00000586548 RBM8AQ9Y5S9 174 aaKnown RBP26.81■■□□□ 1.88
CIRBP-208ENST00000586548 COL24A1Q17RW2 1714 aa26.81■■□□□ 1.88
CIRBP-208ENST00000586548 PDE8BO95263 885 aa26.8■■□□□ 1.88
CIRBP-208ENST00000586548 BCL2L12Q9HB09 334 aa26.8■■□□□ 1.88
CIRBP-208ENST00000586548 ZNF589Q86UQ0 364 aaPredicted RBP26.79■■□□□ 1.88
CIRBP-208ENST00000586548 FOXD4L1Q9NU39 408 aa26.79■■□□□ 1.88
CIRBP-208ENST00000586548 PRPF40BQ6NWY9 871 aaKnown RBP26.79■■□□□ 1.88
CIRBP-208ENST00000586548 UPF3BQ9BZI7 483 aaKnown RBP26.79■■□□□ 1.88
CIRBP-208ENST00000586548 BRWD3Q6RI45 1802 aa26.78■■□□□ 1.88
CIRBP-208ENST00000586548 KCNJ4P48050 445 aa26.78■■□□□ 1.88
CIRBP-208ENST00000586548 MCMDC2Q4G0Z9 681 aa26.78■■□□□ 1.88
CIRBP-208ENST00000586548 USPL1Q5W0Q7 1092 aa26.78■■□□□ 1.88
CIRBP-208ENST00000586548 ZNF512BQ96KM6 892 aaPredicted RBP26.78■■□□□ 1.88
CIRBP-208ENST00000586548 TM6SF1Q9BZW5 370 aa26.78■■□□□ 1.88
CIRBP-208ENST00000586548 CASZ1Q86V15 1759 aa26.77■■□□□ 1.88
CIRBP-208ENST00000586548 ZPR1O75312 459 aa26.77■■□□□ 1.88
CIRBP-208ENST00000586548 TAF5LO75529 589 aa26.77■■□□□ 1.88
CIRBP-208ENST00000586548 MPHOSPH8Q99549 860 aa26.77■■□□□ 1.88
CIRBP-208ENST00000586548 HELLSQ9NRZ9 838 aa26.77■■□□□ 1.88
CIRBP-208ENST00000586548 C4AP0C0L4 1744 aa26.76■■□□□ 1.88
CIRBP-208ENST00000586548 ZKSCAN1P17029 563 aaPredicted RBP26.76■■□□□ 1.88
CIRBP-208ENST00000586548 PUM3Q15397 648 aaKnown RBP26.76■■□□□ 1.88
CIRBP-208ENST00000586548 LRRFIP1Q32MZ4 808 aaKnown RBP26.76■■□□□ 1.88
CIRBP-208ENST00000586548 TBC1D9BQ66K14 1250 aa26.76■■□□□ 1.88
CIRBP-208ENST00000586548 CREB3L3Q68CJ9 461 aa26.76■■□□□ 1.88
CIRBP-208ENST00000586548 TMX3Q96JJ7 454 aa26.76■■□□□ 1.88
CIRBP-208ENST00000586548 CWC22Q9HCG8 908 aaKnown RBP26.76■■□□□ 1.88
CIRBP-208ENST00000586548 SEC31BQ9NQW1 1179 aa26.76■■□□□ 1.88
CIRBP-208ENST00000586548 IGHMBP2P38935 993 aaKnown RBP26.76■■□□□ 1.87
CIRBP-208ENST00000586548 ERFEQ4G0M1 354 aa26.76■■□□□ 1.87
CIRBP-208ENST00000586548 RNF20Q5VTR2 975 aa26.76■■□□□ 1.87
CIRBP-208ENST00000586548 FAM196AQ6ZSG2 479 aa26.76■■□□□ 1.87
CIRBP-208ENST00000586548 NYXQ9GZU5 481 aa26.76■■□□□ 1.87
CIRBP-208ENST00000586548 FGFR2P21802 821 aa26.75■■□□□ 1.87
CIRBP-208ENST00000586548 RAB3GAP1Q15042 981 aa26.75■■□□□ 1.87
CIRBP-208ENST00000586548 ZMYM1Q5SVZ6 1142 aa26.75■■□□□ 1.87
CIRBP-208ENST00000586548 LPIN2Q92539 896 aa26.75■■□□□ 1.87
CIRBP-208ENST00000586548 TTC14Q96N46 770 aa26.75■■□□□ 1.87
CIRBP-208ENST00000586548 SRP68Q9UHB9 627 aaKnown RBP26.75■■□□□ 1.87
CIRBP-208ENST00000586548 AKAP11Q9UKA4 1901 aa26.74■■□□□ 1.87
CIRBP-208ENST00000586548 SSFA2P28290 1259 aa26.74■■□□□ 1.87
CIRBP-208ENST00000586548 SF3B3Q15393 1217 aaKnown RBP26.74■■□□□ 1.87
CIRBP-208ENST00000586548 SMIM5Q71RC9 77 aa26.74■■□□□ 1.87
CIRBP-208ENST00000586548 HMG20BQ9P0W2 317 aa26.74■■□□□ 1.87
CIRBP-208ENST00000586548 SLC27A2O14975 620 aa26.73■■□□□ 1.87
CIRBP-208ENST00000586548 RNF113AO15541 343 aaKnown RBP26.73■■□□□ 1.87
CIRBP-208ENST00000586548 FKBP4Q02790 459 aaKnown RBP eCLIP26.73■■□□□ 1.87
CIRBP-208ENST00000586548 CUL4AQ13619 759 aa26.73■■□□□ 1.87
CIRBP-208ENST00000586548 SLC10A5Q5PT55 438 aa26.73■■□□□ 1.87
CIRBP-208ENST00000586548 KRT27Q7Z3Y8 459 aa26.73■■□□□ 1.87
CIRBP-208ENST00000586548 ZNF772Q68DY9 489 aaPredicted RBP26.73■■□□□ 1.87
CIRBP-208ENST00000586548 BICDL1Q6ZP65 573 aa26.73■■□□□ 1.87
CIRBP-208ENST00000586548 ARHGEF1Q92888 912 aaKnown RBP26.73■■□□□ 1.87
CIRBP-208ENST00000586548 SETDB2Q96T68 719 aa26.73■■□□□ 1.87
CIRBP-208ENST00000586548 CDC5LQ99459 802 aaKnown RBP26.73■■□□□ 1.87
CIRBP-208ENST00000586548 MYH7P12883 1935 aa26.72■■□□□ 1.87
CIRBP-208ENST00000586548 CASTP20810 708 aaKnown RBP26.72■■□□□ 1.87
CIRBP-208ENST00000586548 SCARF1Q14162 830 aa26.72■■□□□ 1.87
CIRBP-208ENST00000586548 JAKMIP1Q96N16 626 aaKnown RBP26.72■■□□□ 1.87
CIRBP-208ENST00000586548 SEC62Q99442 399 aaKnown RBP26.72■■□□□ 1.87
CIRBP-208ENST00000586548 ZSWIM6Q9HCJ5 1215 aa26.72■■□□□ 1.87
CIRBP-208ENST00000586548 CHGBP05060 677 aa26.71■■□□□ 1.87
CIRBP-208ENST00000586548 SLC5A1P13866 664 aa26.71■■□□□ 1.87
CIRBP-208ENST00000586548 U3KPZ7 1027 aaPredicted RBP26.71■■□□□ 1.87
CIRBP-208ENST00000586548 RPAP1Q9BWH6 1393 aaPredicted RBP26.71■■□□□ 1.87
CIRBP-208ENST00000586548 ZFYP08048 801 aaPredicted RBP26.7■■□□□ 1.87
CIRBP-208ENST00000586548 UQCRFS1P1P0C7P4 283 aa26.7■■□□□ 1.87
CIRBP-208ENST00000586548 ARID4AP29374 1257 aaPredicted RBP26.7■■□□□ 1.87
CIRBP-208ENST00000586548 ZAP70P43403 619 aa26.7■■□□□ 1.87
CIRBP-208ENST00000586548 TSGA10IPQ3SY00 556 aa26.7■■□□□ 1.87
CIRBP-208ENST00000586548 AMIGO3Q86WK7 504 aa26.7■■□□□ 1.87
CIRBP-208ENST00000586548 INTS4Q96HW7 963 aaKnown RBP26.7■■□□□ 1.87
CIRBP-208ENST00000586548 PSMA5P28066 241 aa26.7■■□□□ 1.86
CIRBP-208ENST00000586548 MCAMP43121 646 aa26.7■■□□□ 1.86
CIRBP-208ENST00000586548 ADCK5Q3MIX3 580 aa26.7■■□□□ 1.86
CIRBP-208ENST00000586548 CCDC129Q6ZRS4 1044 aa26.7■■□□□ 1.86
CIRBP-208ENST00000586548 HELBQ8NG08 1087 aaPredicted RBP26.7■■□□□ 1.86
CIRBP-208ENST00000586548 CYP46A1Q9Y6A2 500 aa26.7■■□□□ 1.86
CIRBP-208ENST00000586548 ADRA2BP18089 450 aa26.69■■□□□ 1.86
CIRBP-208ENST00000586548 GTF2E1P29083 439 aaPredicted RBP26.69■■□□□ 1.86
CIRBP-208ENST00000586548 TRAPPC3LQ5T215 181 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms