RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 MAP2K1Q02750 393 aaPredicted RBP21.81■■□□□ 1.08
MBD3-204ENST00000585967 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
MBD3-204ENST00000585967 TBC1D16Q8TBP0 767 aa21.81■■□□□ 1.08
MBD3-204ENST00000585967 COL4A1P02462 1669 aa21.81■■□□□ 1.08
MBD3-204ENST00000585967 XDHP47989 1333 aa21.8■■□□□ 1.08
MBD3-204ENST00000585967 YDJCA8MPS7 323 aa21.8■■□□□ 1.08
MBD3-204ENST00000585967 CTCFP49711 727 aaPredicted RBP21.8■■□□□ 1.08
MBD3-204ENST00000585967 MICALL2Q8IY33 904 aa21.8■■□□□ 1.08
MBD3-204ENST00000585967 MYH16Q9H6N6 1097 aa21.8■■□□□ 1.08
MBD3-204ENST00000585967 POLLQ9UGP5 575 aa21.8■■□□□ 1.08
MBD3-204ENST00000585967 WDR33Q9C0J8 1336 aaKnown RBP21.8■■□□□ 1.08
MBD3-204ENST00000585967 SLC4A2P04920 1241 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 CTSWP56202 376 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 CCDC184Q52MB2 194 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 CDC37L1Q7L3B6 337 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 WDR63Q8IWG1 891 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 BEGAINQ9BUH8 593 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
MBD3-204ENST00000585967 PSMD14O00487 310 aa21.78■■□□□ 1.08
MBD3-204ENST00000585967 PGAP2Q9UHJ9 254 aa21.78■■□□□ 1.08
MBD3-204ENST00000585967 FANCIQ9NVI1 1328 aa21.78■■□□□ 1.08
MBD3-204ENST00000585967 RTL9Q8NET4 1388 aa21.77■■□□□ 1.08
MBD3-204ENST00000585967 FKBP5Q13451 457 aaPredicted RBP21.77■■□□□ 1.08
MBD3-204ENST00000585967 PRDM10Q9NQV6 1147 aa21.77■■□□□ 1.08
MBD3-204ENST00000585967 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
MBD3-204ENST00000585967 TRAF5O00463 557 aa21.76■■□□□ 1.07
MBD3-204ENST00000585967 ZNF609O15014 1411 aa21.76■■□□□ 1.07
MBD3-204ENST00000585967 CELF2O95319 508 aaKnown RBP21.76■■□□□ 1.07
MBD3-204ENST00000585967 FLIIQ13045 1269 aa21.76■■□□□ 1.07
MBD3-204ENST00000585967 CAPNS2Q96L46 248 aa21.76■■□□□ 1.07
MBD3-204ENST00000585967 CCDC85AQ96PX6 553 aaPredicted RBP21.76■■□□□ 1.07
MBD3-204ENST00000585967 NEURL1BA8MQ27 555 aa21.75■■□□□ 1.07
MBD3-204ENST00000585967 FOXN1O15353 648 aa21.75■■□□□ 1.07
MBD3-204ENST00000585967 IGKV5-2P06315 115 aa21.75■■□□□ 1.07
MBD3-204ENST00000585967 ATP2B4P23634 1241 aa21.75■■□□□ 1.07
MBD3-204ENST00000585967 DOK7Q18PE1 504 aa21.75■■□□□ 1.07
MBD3-204ENST00000585967 TRPM4Q8TD43 1214 aa21.75■■□□□ 1.07
MBD3-204ENST00000585967 GLIS2Q9BZE0 524 aaPredicted RBP21.75■■□□□ 1.07
MBD3-204ENST00000585967 IGHMBP2P38935 993 aaKnown RBP21.74■■□□□ 1.07
MBD3-204ENST00000585967 UBE3BQ7Z3V4 1068 aa21.74■■□□□ 1.07
MBD3-204ENST00000585967 HHIPL1Q96JK4 782 aa21.74■■□□□ 1.07
MBD3-204ENST00000585967 WBP1LQ9NX94 342 aa21.74■■□□□ 1.07
MBD3-204ENST00000585967 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
MBD3-204ENST00000585967 GRM1Q13255 1194 aa21.73■■□□□ 1.07
MBD3-204ENST00000585967 CWF19L2Q2TBE0 894 aaKnown RBP21.73■■□□□ 1.07
MBD3-204ENST00000585967 DCPSQ96C86 337 aaKnown RBP21.73■■□□□ 1.07
MBD3-204ENST00000585967 ZNF408Q9H9D4 720 aa21.73■■□□□ 1.07
MBD3-204ENST00000585967 BSDC1Q9NW68 430 aaPredicted RBP21.73■■□□□ 1.07
MBD3-204ENST00000585967 MED23Q9ULK4 1368 aa21.73■■□□□ 1.07
MBD3-204ENST00000585967 CST9Q5W186 159 aa21.72■■□□□ 1.07
MBD3-204ENST00000585967 AGBL3Q8NEM8 1001 aa21.72■■□□□ 1.07
MBD3-204ENST00000585967 TTLL11Q8NHH1 800 aa21.72■■□□□ 1.07
MBD3-204ENST00000585967 DNAAF4Q8WXU2 420 aa21.72■■□□□ 1.07
MBD3-204ENST00000585967 JARID2Q92833 1246 aaPredicted RBP21.72■■□□□ 1.07
MBD3-204ENST00000585967 VIL1P09327 827 aaKnown RBP21.71■■□□□ 1.07
MBD3-204ENST00000585967 MAP2K2P36507 400 aa21.71■■□□□ 1.07
MBD3-204ENST00000585967 HIRAP54198 1017 aaPredicted RBP21.71■■□□□ 1.07
MBD3-204ENST00000585967 KIF4BQ2VIQ3 1234 aa21.71■■□□□ 1.07
MBD3-204ENST00000585967 TBC1D10BQ4KMP7 808 aaPredicted RBP21.71■■□□□ 1.07
MBD3-204ENST00000585967 PODNQ7Z5L7 613 aa21.71■■□□□ 1.07
MBD3-204ENST00000585967 SAPCD2Q86UD0 394 aa21.71■■□□□ 1.07
MBD3-204ENST00000585967 LINS1Q8NG48 757 aa21.71■■□□□ 1.07
MBD3-204ENST00000585967 GPR101Q96P66 508 aaPredicted RBP21.71■■□□□ 1.07
MBD3-204ENST00000585967 A0A1B0GUL6 1792 aa21.71■■□□□ 1.07
MBD3-204ENST00000585967 GCKRQ14397 625 aa21.7■■□□□ 1.06
MBD3-204ENST00000585967 CYP4F22Q6NT55 531 aa21.7■■□□□ 1.06
MBD3-204ENST00000585967 SAMD7Q7Z3H4 446 aa21.7■■□□□ 1.06
MBD3-204ENST00000585967 KRT26Q7Z3Y9 468 aa21.7■■□□□ 1.06
MBD3-204ENST00000585967 GREM2Q9H772 168 aa21.7■■□□□ 1.06
MBD3-204ENST00000585967 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
MBD3-204ENST00000585967 AKAP11Q9UKA4 1901 aa21.7■■□□□ 1.06
MBD3-204ENST00000585967 H7C1W4 665 aa21.69■■□□□ 1.06
MBD3-204ENST00000585967 FMR1Q06787 632 aaKnown RBP eCLIP21.69■■□□□ 1.06
MBD3-204ENST00000585967 RSBN1LQ6PCB5 846 aaPredicted RBP21.69■■□□□ 1.06
MBD3-204ENST00000585967 G2E3Q7L622 706 aa21.69■■□□□ 1.06
MBD3-204ENST00000585967 SULF1Q8IWU6 871 aa21.69■■□□□ 1.06
MBD3-204ENST00000585967 MPHOSPH8Q99549 860 aa21.69■■□□□ 1.06
MBD3-204ENST00000585967 PLA2G12BQ9BX93 195 aa21.69■■□□□ 1.06
MBD3-204ENST00000585967 ANKRD2Q9GZV1 360 aa21.69■■□□□ 1.06
MBD3-204ENST00000585967 CA12O43570 354 aa21.68■■□□□ 1.06
MBD3-204ENST00000585967 CAPN15O75808 1086 aa21.68■■□□□ 1.06
MBD3-204ENST00000585967 RBM26Q5T8P6 1007 aaKnown RBP21.68■■□□□ 1.06
MBD3-204ENST00000585967 MYO3BQ8WXR4 1341 aa21.68■■□□□ 1.06
MBD3-204ENST00000585967 ZNF646O15015 1829 aaPredicted RBP21.67■■□□□ 1.06
MBD3-204ENST00000585967 SHTN1A0MZ66 631 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 USP17L3A6NCW0 530 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 USP17L4A6NCW7 530 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 VAMP4O75379 141 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 CCT4P50991 539 aaKnown RBP21.67■■□□□ 1.06
MBD3-204ENST00000585967 EXOSC9Q06265 439 aaKnown RBP21.67■■□□□ 1.06
MBD3-204ENST00000585967 USP17L1Q7RTZ2 530 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 USP48Q86UV5 1035 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 FAM9BQ8IZU0 186 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 MINPP1Q9UNW1 487 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 LEMD3Q9Y2U8 911 aa21.67■■□□□ 1.06
MBD3-204ENST00000585967 ITGA6P23229 1130 aa21.66■■□□□ 1.06
MBD3-204ENST00000585967 KCNJ4P48050 445 aa21.66■■□□□ 1.06
MBD3-204ENST00000585967 LBX1P52954 281 aa21.66■■□□□ 1.06
MBD3-204ENST00000585967 C2orf69Q8N8R5 385 aa21.66■■□□□ 1.06
MBD3-204ENST00000585967 KCNQ5Q9NR82 932 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms