RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 ECE1P42892 770 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 FMR1Q06787 632 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 EYA3Q99504 573 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 DBNDD1Q9H9R9 158 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 POLLQ9UGP5 575 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
PRKCSH-201ENST00000585325 G2E3Q7L622 706 aa17.16■□□□□ 0.34
PRKCSH-201ENST00000585325 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-201ENST00000585325 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
PRKCSH-201ENST00000585325 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
PRKCSH-201ENST00000585325 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
PRKCSH-201ENST00000585325 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
PRKCSH-201ENST00000585325 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
PRKCSH-201ENST00000585325 ECE2O60344 883 aa17.14■□□□□ 0.33
PRKCSH-201ENST00000585325 DOK7Q18PE1 504 aa17.14■□□□□ 0.33
PRKCSH-201ENST00000585325 ANKRD18AQ8IVF6 992 aa17.14■□□□□ 0.33
PRKCSH-201ENST00000585325 WDR63Q8IWG1 891 aa17.14■□□□□ 0.33
PRKCSH-201ENST00000585325 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
PRKCSH-201ENST00000585325 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 TRAF5O00463 557 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 PSMD14O00487 310 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 UFL1O94874 794 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 CTSWP56202 376 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 FLIIQ13045 1269 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 CNOT7Q9UIV1 285 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 MYH3P11055 1940 aa17.13■□□□□ 0.33
PRKCSH-201ENST00000585325 G3V3G9 751 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 H7C1D1 291 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 CST9Q5W186 159 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 MICALL2Q8IY33 904 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 TLL2Q9Y6L7 1015 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
PRKCSH-201ENST00000585325 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 AOC2O75106 756 aa17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 VAMP4O75379 141 aa17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 EXOSC9Q06265 439 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 TRPM4Q8TD43 1214 aa17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
PRKCSH-201ENST00000585325 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 MAP2K2P36507 400 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 TTLL11Q8NHH1 800 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 XDHP47989 1333 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 RTL9Q8NET4 1388 aa17.1■□□□□ 0.33
PRKCSH-201ENST00000585325 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-201ENST00000585325 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
PRKCSH-201ENST00000585325 DPF2Q92785 391 aa17.09■□□□□ 0.33
PRKCSH-201ENST00000585325 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-201ENST00000585325 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
PRKCSH-201ENST00000585325 GREM2Q9H772 168 aa17.09■□□□□ 0.33
PRKCSH-201ENST00000585325 H7C1W4 665 aa17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 CA12O43570 354 aa17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 RPS12P25398 132 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 GCKRQ14397 625 aa17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 PGAP2Q9UHJ9 254 aa17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
PRKCSH-201ENST00000585325 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
PRKCSH-201ENST00000585325 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
PRKCSH-201ENST00000585325 TBC1D10BQ4KMP7 808 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-201ENST00000585325 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
PRKCSH-201ENST00000585325 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
PRKCSH-201ENST00000585325 IGHMBP2P38935 993 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-201ENST00000585325 DGKZQ13574 1117 aa17.06■□□□□ 0.32
PRKCSH-201ENST00000585325 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-201ENST00000585325 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
PRKCSH-201ENST00000585325 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
PRKCSH-201ENST00000585325 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-201ENST00000585325 EGFRP00533 1210 aa17.05■□□□□ 0.32
PRKCSH-201ENST00000585325 VIL1P09327 827 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-201ENST00000585325 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
PRKCSH-201ENST00000585325 MINPP1Q9UNW1 487 aa17.05■□□□□ 0.32
PRKCSH-201ENST00000585325 CASP8AP2Q9UKL3 1982 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 F6X3S4 739 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 ITGA6P23229 1130 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 CASP7P55210 303 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 PSME4Q14997 1843 aa17.04■□□□□ 0.32
PRKCSH-201ENST00000585325 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-201ENST00000585325 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
PRKCSH-201ENST00000585325 MED23Q9ULK4 1368 aa17.02■□□□□ 0.32
PRKCSH-201ENST00000585325 WTIPA6NIX2 430 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-201ENST00000585325 RSBN1LQ6PCB5 846 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms