RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 CDC5LQ99459 802 aaKnown RBP21.88■■□□□ 1.09
ITGB4-213ENST00000584939 ADARB2Q9NS39 739 aaKnown RBP21.88■■□□□ 1.09
ITGB4-213ENST00000584939 TMEM88BA6NKF7 163 aa21.87■■□□□ 1.09
ITGB4-213ENST00000584939 UFL1O94874 794 aa21.87■■□□□ 1.09
ITGB4-213ENST00000584939 ZC3H12CQ9C0D7 883 aaKnown RBP21.87■■□□□ 1.09
ITGB4-213ENST00000584939 GREM2Q9H772 168 aa21.87■■□□□ 1.09
ITGB4-213ENST00000584939 MKRN1Q9UHC7 482 aaKnown RBP21.87■■□□□ 1.09
ITGB4-213ENST00000584939 GGA1Q9UJY5 639 aa21.87■■□□□ 1.09
ITGB4-213ENST00000584939 ECE2O60344 883 aa21.86■■□□□ 1.09
ITGB4-213ENST00000584939 PSMD14O00487 310 aa21.85■■□□□ 1.09
ITGB4-213ENST00000584939 CNOT7Q9UIV1 285 aaKnown RBP21.85■■□□□ 1.09
ITGB4-213ENST00000584939 F6X3S4 739 aa21.84■■□□□ 1.09
ITGB4-213ENST00000584939 G3V3G9 751 aa21.84■■□□□ 1.09
ITGB4-213ENST00000584939 CASP7P55210 303 aa21.84■■□□□ 1.09
ITGB4-213ENST00000584939 DCAF8Q5TAQ9 597 aa21.84■■□□□ 1.09
ITGB4-213ENST00000584939 PLA2G12BQ9BX93 195 aa21.84■■□□□ 1.09
ITGB4-213ENST00000584939 KCNQ5Q9NR82 932 aa21.84■■□□□ 1.09
ITGB4-213ENST00000584939 ZBTB12Q9Y330 459 aaPredicted RBP21.84■■□□□ 1.09
ITGB4-213ENST00000584939 XDHP47989 1333 aa21.83■■□□□ 1.09
ITGB4-213ENST00000584939 BSDC1Q9NW68 430 aaPredicted RBP21.83■■□□□ 1.09
ITGB4-213ENST00000584939 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
ITGB4-213ENST00000584939 SHTN1A0MZ66 631 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 H7C1D1 291 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 ATP2B4P23634 1241 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 BEND3Q5T5X7 828 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 MICALL2Q8IY33 904 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 DPF2Q92785 391 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 CNTNAP1P78357 1384 aa21.82■■□□□ 1.08
ITGB4-213ENST00000584939 HIRAP54198 1017 aaPredicted RBP21.81■■□□□ 1.08
ITGB4-213ENST00000584939 FMR1Q06787 632 aaKnown RBP eCLIP21.81■■□□□ 1.08
ITGB4-213ENST00000584939 MINPP1Q9UNW1 487 aa21.81■■□□□ 1.08
ITGB4-213ENST00000584939 TRAF5O00463 557 aa21.8■■□□□ 1.08
ITGB4-213ENST00000584939 CSF1RP07333 972 aa21.8■■□□□ 1.08
ITGB4-213ENST00000584939 RPS12P25398 132 aaKnown RBP21.8■■□□□ 1.08
ITGB4-213ENST00000584939 TRPM4Q8TD43 1214 aa21.8■■□□□ 1.08
ITGB4-213ENST00000584939 PGAP2Q9UHJ9 254 aa21.8■■□□□ 1.08
ITGB4-213ENST00000584939 ITGA6P23229 1130 aa21.79■■□□□ 1.08
ITGB4-213ENST00000584939 IGHMBP2P38935 993 aaKnown RBP21.79■■□□□ 1.08
ITGB4-213ENST00000584939 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
ITGB4-213ENST00000584939 ZC3H15Q8WU90 426 aaKnown RBP21.79■■□□□ 1.08
ITGB4-213ENST00000584939 WTIPA6NIX2 430 aaPredicted RBP21.78■■□□□ 1.08
ITGB4-213ENST00000584939 VIL1P09327 827 aaKnown RBP21.78■■□□□ 1.08
ITGB4-213ENST00000584939 HSPA1AP0DMV8 641 aaKnown RBP21.78■■□□□ 1.08
ITGB4-213ENST00000584939 HSPA1BP0DMV9 641 aaKnown RBP21.78■■□□□ 1.08
ITGB4-213ENST00000584939 ABT1Q9ULW3 272 aaKnown RBP21.78■■□□□ 1.08
ITGB4-213ENST00000584939 CACNA1FO60840 1977 aa21.78■■□□□ 1.08
ITGB4-213ENST00000584939 E9PSI1 815 aa21.77■■□□□ 1.08
ITGB4-213ENST00000584939 VEGFBP49765 207 aa21.77■■□□□ 1.08
ITGB4-213ENST00000584939 DEFB115Q30KQ5 88 aa21.77■■□□□ 1.08
ITGB4-213ENST00000584939 SAMD7Q7Z3H4 446 aa21.77■■□□□ 1.08
ITGB4-213ENST00000584939 GLIS2Q9BZE0 524 aaPredicted RBP21.77■■□□□ 1.08
ITGB4-213ENST00000584939 RASSF10A6NK89 507 aa21.76■■□□□ 1.07
ITGB4-213ENST00000584939 CCT4P50991 539 aaKnown RBP21.76■■□□□ 1.07
ITGB4-213ENST00000584939 FOXO4P98177 505 aa21.76■■□□□ 1.07
ITGB4-213ENST00000584939 CST9Q5W186 159 aa21.76■■□□□ 1.07
ITGB4-213ENST00000584939 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
ITGB4-213ENST00000584939 MPHOSPH8Q99549 860 aa21.76■■□□□ 1.07
ITGB4-213ENST00000584939 TBC1D10BQ4KMP7 808 aaPredicted RBP21.75■■□□□ 1.07
ITGB4-213ENST00000584939 ANKRD18BA2A2Z9 1011 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 GRM8O00222 908 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 SLFN5Q08AF3 891 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 RBM26Q5T8P6 1007 aaKnown RBP21.74■■□□□ 1.07
ITGB4-213ENST00000584939 IFFO2Q5TF58 517 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 CDC37L1Q7L3B6 337 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 PODNQ7Z5L7 613 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 ANKRD2Q9GZV1 360 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 LEMD3Q9Y2U8 911 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
ITGB4-213ENST00000584939 MYH3P11055 1940 aa21.73■■□□□ 1.07
ITGB4-213ENST00000584939 EGFRP00533 1210 aa21.73■■□□□ 1.07
ITGB4-213ENST00000584939 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
ITGB4-213ENST00000584939 RSBN1LQ6PCB5 846 aaPredicted RBP21.73■■□□□ 1.07
ITGB4-213ENST00000584939 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
ITGB4-213ENST00000584939 SRCIN1Q9C0H9 1055 aa21.73■■□□□ 1.07
ITGB4-213ENST00000584939 C9orf78Q9NZ63 289 aaPredicted RBP21.73■■□□□ 1.07
ITGB4-213ENST00000584939 CHMP3Q9Y3E7 222 aa21.73■■□□□ 1.07
ITGB4-213ENST00000584939 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
ITGB4-213ENST00000584939 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
ITGB4-213ENST00000584939 CELF2O95319 508 aaKnown RBP21.72■■□□□ 1.07
ITGB4-213ENST00000584939 EPHA10Q5JZY3 1008 aa21.72■■□□□ 1.07
ITGB4-213ENST00000584939 LMBR1LQ6UX01 489 aa21.72■■□□□ 1.07
ITGB4-213ENST00000584939 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
ITGB4-213ENST00000584939 AGBL3Q8NEM8 1001 aa21.72■■□□□ 1.07
ITGB4-213ENST00000584939 CHRNDQ07001 517 aa21.71■■□□□ 1.07
ITGB4-213ENST00000584939 COL13A1Q5TAT6 717 aaPredicted RBP21.71■■□□□ 1.07
ITGB4-213ENST00000584939 USP48Q86UV5 1035 aa21.71■■□□□ 1.07
ITGB4-213ENST00000584939 CDCA7LQ96GN5 454 aa21.71■■□□□ 1.07
ITGB4-213ENST00000584939 ZNF804BA4D1E1 1349 aa21.71■■□□□ 1.07
ITGB4-213ENST00000584939 KIF4BQ2VIQ3 1234 aa21.7■■□□□ 1.06
ITGB4-213ENST00000584939 TXNRD3Q86VQ6 643 aa21.7■■□□□ 1.06
ITGB4-213ENST00000584939 TRMT2AQ8IZ69 625 aaKnown RBP21.7■■□□□ 1.06
ITGB4-213ENST00000584939 COA1Q9GZY4 146 aa21.7■■□□□ 1.06
ITGB4-213ENST00000584939 TLL2Q9Y6L7 1015 aa21.7■■□□□ 1.06
ITGB4-213ENST00000584939 WDR33Q9C0J8 1336 aaKnown RBP21.7■■□□□ 1.06
ITGB4-213ENST00000584939 SCN9AQ15858 1988 aa21.7■■□□□ 1.06
ITGB4-213ENST00000584939 KCNJ4P48050 445 aa21.69■■□□□ 1.06
ITGB4-213ENST00000584939 PAXIP1Q6ZW49 1069 aaPredicted RBP21.69■■□□□ 1.06
ITGB4-213ENST00000584939 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
ITGB4-213ENST00000584939 DCPSQ96C86 337 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms