RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
TTC39C-208ENST00000584095 NAALADL2Q58DX5 795 aa9.1□□□□□ -0.95
TTC39C-208ENST00000584095 COL13A1Q5TAT6 717 aaPredicted RBP9.1□□□□□ -0.95
TTC39C-208ENST00000584095 BHMTQ93088 406 aa9.1□□□□□ -0.95
TTC39C-208ENST00000584095 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
TTC39C-208ENST00000584095 MAP3K6O95382 1288 aa9.09□□□□□ -0.95
TTC39C-208ENST00000584095 PSAPP07602 524 aa9.09□□□□□ -0.95
TTC39C-208ENST00000584095 HOXD8P13378 290 aaPredicted RBP9.09□□□□□ -0.95
TTC39C-208ENST00000584095 SOX18P35713 384 aa9.09□□□□□ -0.95
TTC39C-208ENST00000584095 EHD4Q9H223 541 aa9.09□□□□□ -0.95
TTC39C-208ENST00000584095 EFCC1Q9HA90 598 aa9.09□□□□□ -0.95
TTC39C-208ENST00000584095 KIF4AO95239 1232 aa9.08□□□□□ -0.96
TTC39C-208ENST00000584095 ACPPP15309 386 aa9.08□□□□□ -0.96
TTC39C-208ENST00000584095 FGFR3P22607 806 aa9.08□□□□□ -0.96
TTC39C-208ENST00000584095 TAF1CQ15572 869 aaPredicted RBP9.08□□□□□ -0.96
TTC39C-208ENST00000584095 CNTNAP3BQ96NU0 1288 aa9.08□□□□□ -0.96
TTC39C-208ENST00000584095 CNTNAP3Q9BZ76 1288 aa9.08□□□□□ -0.96
TTC39C-208ENST00000584095 IRX2Q9BZI1 471 aaPredicted RBP9.08□□□□□ -0.96
TTC39C-208ENST00000584095 TGIF2Q9GZN2 237 aa9.08□□□□□ -0.96
TTC39C-208ENST00000584095 POTECB2RU33 542 aa9.07□□□□□ -0.96
TTC39C-208ENST00000584095 ST13P50502 369 aaKnown RBP9.07□□□□□ -0.96
TTC39C-208ENST00000584095 PLAURQ03405 335 aa9.07□□□□□ -0.96
TTC39C-208ENST00000584095 PTPN12Q05209 780 aaKnown RBP9.07□□□□□ -0.96
TTC39C-208ENST00000584095 FAM182BQ5T319 152 aa9.07□□□□□ -0.96
TTC39C-208ENST00000584095 PRPF40BQ6NWY9 871 aaKnown RBP9.07□□□□□ -0.96
TTC39C-208ENST00000584095 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
TTC39C-208ENST00000584095 C3orf58Q8NDZ4 430 aa9.07□□□□□ -0.96
TTC39C-208ENST00000584095 ZKSCAN3Q9BRR0 538 aa9.07□□□□□ -0.96
TTC39C-208ENST00000584095 GPR25O00155 361 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 PPFIA3O75145 1194 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 GSTT1P30711 240 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 CTBSQ01459 385 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 HYAL2Q12891 473 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 ZNF394Q53GI3 561 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 NCAPG2Q86XI2 1143 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 SREK1Q8WXA9 508 aaKnown RBP9.06□□□□□ -0.96
TTC39C-208ENST00000584095 NSUN5Q96P11 429 aaKnown RBP9.06□□□□□ -0.96
TTC39C-208ENST00000584095 TCF12Q99081 682 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 CCSER2Q9H7U1 834 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 ABCB6Q9NP58 842 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 PHF24Q9UPV7 400 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 TRAK1Q9UPV9 953 aa9.06□□□□□ -0.96
TTC39C-208ENST00000584095 HS2ST1Q7LGA3 356 aa9.05□□□□□ -0.96
TTC39C-208ENST00000584095 TINF2Q9BSI4 451 aa9.05□□□□□ -0.96
TTC39C-208ENST00000584095 ACBD3Q9H3P7 528 aa9.05□□□□□ -0.96
TTC39C-208ENST00000584095 LIN7BQ9HAP6 207 aa9.05□□□□□ -0.96
TTC39C-208ENST00000584095 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.05□□□□□ -0.96
TTC39C-208ENST00000584095 PCDHGB7Q9Y5F8 929 aa9.05□□□□□ -0.96
TTC39C-208ENST00000584095 CDC14CA4D256 554 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 LCE2BO14633 110 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 NRLP54845 237 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 FCGRTP55899 365 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 VWA5B2Q8N398 1253 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 CEP120Q8N960 986 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 OSMRQ99650 979 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 GGT7Q9UJ14 662 aa9.04□□□□□ -0.96
TTC39C-208ENST00000584095 DDX41Q9UJV9 622 aaKnown RBP9.04□□□□□ -0.96
TTC39C-208ENST00000584095 ZBTB42B2RXF5 422 aa9.03□□□□□ -0.96
TTC39C-208ENST00000584095 TRPA1O75762 1119 aa9.03□□□□□ -0.96
TTC39C-208ENST00000584095 RACK1P63244 317 aaKnown RBP9.03□□□□□ -0.96
TTC39C-208ENST00000584095 GPLD1P80108 840 aa9.03□□□□□ -0.96
TTC39C-208ENST00000584095 CCNJLQ8IV13 435 aa9.03□□□□□ -0.96
TTC39C-208ENST00000584095 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
TTC39C-208ENST00000584095 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
TTC39C-208ENST00000584095 DZANK1Q9NVP4 752 aa9.03□□□□□ -0.96
TTC39C-208ENST00000584095 TTF2Q9UNY4 1162 aaKnown RBP9.03□□□□□ -0.96
TTC39C-208ENST00000584095 TMEM238LA0A1B0GVL6 79 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 LOC105371045A0A1W2PR82 267 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 C2CD2LO14523 706 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 TNNI2P48788 182 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 MLLT1Q03111 559 aaPredicted RBP9.02□□□□□ -0.97
TTC39C-208ENST00000584095 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 ERMP1Q7Z2K6 904 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 USP48Q86UV5 1035 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 TRPM4Q8TD43 1214 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 HHIPQ96QV1 700 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 SRA1Q9HD15 236 aaKnown RBP9.02□□□□□ -0.97
TTC39C-208ENST00000584095 PPP4R2Q9NY27 417 aa9.02□□□□□ -0.97
TTC39C-208ENST00000584095 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
TTC39C-208ENST00000584095 NFKBIEO00221 500 aa9.01□□□□□ -0.97
TTC39C-208ENST00000584095 FOXR1Q6PIV2 292 aa9.01□□□□□ -0.97
TTC39C-208ENST00000584095 DRC1Q96MC2 740 aa9.01□□□□□ -0.97
TTC39C-208ENST00000584095 CAPN10Q9HC96 672 aa9.01□□□□□ -0.97
TTC39C-208ENST00000584095 COPRSQ9NQ92 184 aa9.01□□□□□ -0.97
TTC39C-208ENST00000584095 METTL12A8MUP2 240 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 J3QW42 95 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 GRIA4P48058 902 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 MAP3K10Q02779 954 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 ZNF468Q5VIY5 522 aaPredicted RBP9□□□□□ -0.97
TTC39C-208ENST00000584095 DTHD1Q6ZMT9 781 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 HFE2Q6ZVN8 426 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 SV2AQ7L0J3 742 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 SYT9Q86SS6 491 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 ZNF654Q8IZM8 581 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 NANOS1Q8WY41 292 aaKnown RBP9□□□□□ -0.97
TTC39C-208ENST00000584095 BHLHE41Q9C0J9 482 aaPredicted RBP9□□□□□ -0.97
TTC39C-208ENST00000584095 DNAJB12Q9NXW2 375 aaKnown RBP9□□□□□ -0.97
TTC39C-208ENST00000584095 PRR12Q9ULL5 1215 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 PPM1HQ9ULR3 514 aa9□□□□□ -0.97
TTC39C-208ENST00000584095 LOC102724428A0A0B4J2F2 783 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms