RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 H0YGN5 161 aa12.48□□□□□ -0.41
MKS1-212ENST00000583577 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
MKS1-212ENST00000583577 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
MKS1-212ENST00000583577 HLFQ16534 295 aa12.48□□□□□ -0.41
MKS1-212ENST00000583577 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
MKS1-212ENST00000583577 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
MKS1-212ENST00000583577 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
MKS1-212ENST00000583577 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
MKS1-212ENST00000583577 EGFRP00533 1210 aa12.47□□□□□ -0.41
MKS1-212ENST00000583577 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
MKS1-212ENST00000583577 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
MKS1-212ENST00000583577 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
MKS1-212ENST00000583577 TRIM17Q9Y577 477 aa12.47□□□□□ -0.41
MKS1-212ENST00000583577 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
MKS1-212ENST00000583577 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 KCNQ3O43525 872 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 DEKP35659 375 aaKnown RBP12.46□□□□□ -0.41
MKS1-212ENST00000583577 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
MKS1-212ENST00000583577 PDE3AQ14432 1141 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.41
MKS1-212ENST00000583577 TAF1P21675 1872 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
MKS1-212ENST00000583577 MKRN3Q13064 507 aaKnown RBP12.45□□□□□ -0.42
MKS1-212ENST00000583577 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
MKS1-212ENST00000583577 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 BABAM1Q9NWV8 329 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 MIS18AQ9NYP9 233 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
MKS1-212ENST00000583577 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
MKS1-212ENST00000583577 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
MKS1-212ENST00000583577 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
MKS1-212ENST00000583577 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
MKS1-212ENST00000583577 NOM1Q5C9Z4 860 aaKnown RBP12.44□□□□□ -0.42
MKS1-212ENST00000583577 GGA3Q9NZ52 723 aa12.44□□□□□ -0.42
MKS1-212ENST00000583577 ATP6V0A2Q9Y487 856 aa12.44□□□□□ -0.42
MKS1-212ENST00000583577 PSMD14O00487 310 aa12.43□□□□□ -0.42
MKS1-212ENST00000583577 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
MKS1-212ENST00000583577 MOB2Q70IA6 237 aa12.43□□□□□ -0.42
MKS1-212ENST00000583577 OTOP1Q7RTM1 612 aa12.43□□□□□ -0.42
MKS1-212ENST00000583577 MPNDQ8N594 471 aa12.43□□□□□ -0.42
MKS1-212ENST00000583577 DPF2Q92785 391 aa12.43□□□□□ -0.42
MKS1-212ENST00000583577 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
MKS1-212ENST00000583577 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
MKS1-212ENST00000583577 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
MKS1-212ENST00000583577 ASTN2O75129 1339 aaPredicted RBP12.42□□□□□ -0.42
MKS1-212ENST00000583577 VCANP13611 3396 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 UBE2Q2LH0YL09 131 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
MKS1-212ENST00000583577 TM4SF4P48230 202 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 GNAI1P63096 354 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
MKS1-212ENST00000583577 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
MKS1-212ENST00000583577 PITPNM2Q9BZ72 1349 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 CHL1O00533 1208 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 RGL2O15211 777 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 GPTP24298 496 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
MKS1-212ENST00000583577 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 LAMB2P55268 1798 aa12.41□□□□□ -0.42
MKS1-212ENST00000583577 CT47B1P0C2W7 299 aaPredicted RBP12.4□□□□□ -0.42
MKS1-212ENST00000583577 FKBP1BP68106 108 aa12.4□□□□□ -0.42
MKS1-212ENST00000583577 TTLL12Q14166 644 aaPredicted RBP12.4□□□□□ -0.42
MKS1-212ENST00000583577 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
MKS1-212ENST00000583577 ABCC4O15439 1325 aa12.39□□□□□ -0.43
MKS1-212ENST00000583577 SREBF2Q12772 1141 aa12.39□□□□□ -0.43
MKS1-212ENST00000583577 SUSD4Q5VX71 490 aa12.39□□□□□ -0.43
MKS1-212ENST00000583577 WDR63Q8IWG1 891 aa12.39□□□□□ -0.43
MKS1-212ENST00000583577 DBNDD1Q9H9R9 158 aa12.39□□□□□ -0.43
MKS1-212ENST00000583577 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
MKS1-212ENST00000583577 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
MKS1-212ENST00000583577 IL16Q14005 1332 aa12.38□□□□□ -0.43
MKS1-212ENST00000583577 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
MKS1-212ENST00000583577 ANGEL2Q5VTE6 544 aaKnown RBP12.38□□□□□ -0.43
MKS1-212ENST00000583577 SP8Q8IXZ3 490 aa12.38□□□□□ -0.43
MKS1-212ENST00000583577 ARMC5Q96C12 935 aa12.38□□□□□ -0.43
MKS1-212ENST00000583577 NLRP3Q96P20 1036 aa12.38□□□□□ -0.43
MKS1-212ENST00000583577 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
MKS1-212ENST00000583577 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
MKS1-212ENST00000583577 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
MKS1-212ENST00000583577 SLC4A8Q2Y0W8 1093 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 DPF3Q92784 378 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
MKS1-212ENST00000583577 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
MKS1-212ENST00000583577 TTC28Q96AY4 2481 aa12.36□□□□□ -0.43
MKS1-212ENST00000583577 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
MKS1-212ENST00000583577 SCARF1Q14162 830 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms