RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 COPS6Q7L5N1 327 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 UBE3BQ7Z3V4 1068 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 MAP4K1Q92918 833 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 DBNDD2Q9BQY9 259 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 TUBGCP6Q96RT7 1819 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 AGLP35573 1532 aa12.33□□□□□ -0.44
TOP3A-214ENST00000582981 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 TFCP2Q12800 502 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 IP6K1Q92551 441 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 NEUROD6Q96NK8 337 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 SH2B1Q9NRF2 756 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-214ENST00000582981 PLEKHG1Q9ULL1 1385 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 ZNF165P49910 485 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-214ENST00000582981 DBNLQ9UJU6 430 aaKnown RBP12.32□□□□□ -0.44
TOP3A-214ENST00000582981 COL15A1P39059 1388 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 RPS6KB1P23443 525 aa12.32□□□□□ -0.44
TOP3A-214ENST00000582981 ZNF330Q9Y3S2 320 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-214ENST00000582981 NWD1Q149M9 1564 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 USP27XA6NNY8 438 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 CYP2C19P33261 490 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 C11orf57Q6ZUT1 292 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-214ENST00000582981 ZSCAN31Q96LW9 406 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-214ENST00000582981 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 GJB4Q9NTQ9 266 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 KIF13AQ9H1H9 1805 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 TRIM66O15016 1216 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 GYS2P54840 703 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 APOBRQ0VD83 1088 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 ANKRD24Q8TF21 1146 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 FMNL2Q96PY5 1086 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 RASSF4Q9H2L5 321 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 FMN2Q9NZ56 1722 aa12.31□□□□□ -0.44
TOP3A-214ENST00000582981 PLEKHO1Q53GL0 409 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-214ENST00000582981 KRBA2Q6ZNG9 492 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 NFATC2IPQ8NCF5 419 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 CACTINQ8WUQ7 758 aaKnown RBP12.3□□□□□ -0.44
TOP3A-214ENST00000582981 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 CEMIPQ8WUJ3 1361 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 CYP21A2P08686 494 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 GTF2A1P52655 376 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-214ENST00000582981 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
TOP3A-214ENST00000582981 SYT10Q6XYQ8 523 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 NLRP2Q9NX02 1062 aa12.3□□□□□ -0.44
TOP3A-214ENST00000582981 TAF5LO75529 589 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 APPP05067 770 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 HAND2P61296 217 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 BMS1Q14692 1282 aaKnown RBP12.29□□□□□ -0.44
TOP3A-214ENST00000582981 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 STOX1Q6ZVD7 989 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 ZNF446Q9NWS9 450 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 BIN1O00499 593 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 PSMA5P28066 241 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 TIMM10P62072 90 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 STK11IPQ8N1F8 1099 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 SNRKQ9NRH2 765 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
TOP3A-214ENST00000582981 GOLIM4O00461 696 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 GCP02774 474 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 SCRN1Q12765 414 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 TEX35Q5T0J7 233 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 ZNF594Q96JF6 807 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-214ENST00000582981 NEK1Q96PY6 1258 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 NPHP4O75161 1426 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-214ENST00000582981 ZNF75DP51815 510 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 ERC1Q8IUD2 1116 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-214ENST00000582981 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
TOP3A-214ENST00000582981 CHRNA2Q15822 529 aa12.27□□□□□ -0.44
TOP3A-214ENST00000582981 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.44
TOP3A-214ENST00000582981 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.44
TOP3A-214ENST00000582981 TM6SF1Q9BZW5 370 aa12.27□□□□□ -0.44
TOP3A-214ENST00000582981 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
TOP3A-214ENST00000582981 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
TOP3A-214ENST00000582981 MTX1Q13505 466 aa12.27□□□□□ -0.45
TOP3A-214ENST00000582981 PDIA6Q15084 440 aa12.27□□□□□ -0.45
TOP3A-214ENST00000582981 ERO1AQ96HE7 468 aa12.27□□□□□ -0.45
TOP3A-214ENST00000582981 USP28Q96RU2 1077 aa12.27□□□□□ -0.45
TOP3A-214ENST00000582981 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-214ENST00000582981 SLU7O95391 586 aaKnown RBP12.26□□□□□ -0.45
TOP3A-214ENST00000582981 POLR3DP05423 398 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-214ENST00000582981 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 GPATCH11Q8N954 259 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 CLSTN2Q9H4D0 955 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
TOP3A-214ENST00000582981 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms