RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ATP2B3Q16720 1220 aa13.53□□□□□ -0.24
GGA3-213ENST00000582486 CCDC158Q5M9N0 1113 aa13.53□□□□□ -0.24
GGA3-213ENST00000582486 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
GGA3-213ENST00000582486 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
GGA3-213ENST00000582486 GOLIM4O00461 696 aa13.52□□□□□ -0.24
GGA3-213ENST00000582486 ST18O60284 1047 aa13.52□□□□□ -0.24
GGA3-213ENST00000582486 PDE8BO95263 885 aa13.52□□□□□ -0.24
GGA3-213ENST00000582486 CHGBP05060 677 aa13.52□□□□□ -0.24
GGA3-213ENST00000582486 NEK4P51957 841 aa13.52□□□□□ -0.25
GGA3-213ENST00000582486 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.25
GGA3-213ENST00000582486 TTC39AQ5SRH9 613 aa13.52□□□□□ -0.25
GGA3-213ENST00000582486 ZNF772Q68DY9 489 aaPredicted RBP13.52□□□□□ -0.25
GGA3-213ENST00000582486 KBTBD3Q8NAB2 608 aa13.52□□□□□ -0.25
GGA3-213ENST00000582486 SETDB2Q96T68 719 aa13.52□□□□□ -0.25
GGA3-213ENST00000582486 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.25
GGA3-213ENST00000582486 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
GGA3-213ENST00000582486 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
GGA3-213ENST00000582486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.51□□□□□ -0.25
GGA3-213ENST00000582486 IL17RAQ96F46 866 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 SNRKQ9NRH2 765 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 SCN7AQ01118 1682 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 RFC4P35249 363 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
GGA3-213ENST00000582486 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
GGA3-213ENST00000582486 CCDC171Q6TFL3 1326 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
GGA3-213ENST00000582486 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 SNX14Q9Y5W7 946 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
GGA3-213ENST00000582486 IGHMBP2P38935 993 aaKnown RBP13.5□□□□□ -0.25
GGA3-213ENST00000582486 RFX7Q2KHR2 1363 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 MED23Q9ULK4 1368 aa13.5□□□□□ -0.25
GGA3-213ENST00000582486 TAF5LO75529 589 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 SCARF1Q14162 830 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 NFKBIBQ15653 356 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 PRPF40BQ6NWY9 871 aaKnown RBP13.49□□□□□ -0.25
GGA3-213ENST00000582486 NBPF5PQ86XG9 351 aaPredicted RBP13.49□□□□□ -0.25
GGA3-213ENST00000582486 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 SEC62Q99442 399 aaKnown RBP13.49□□□□□ -0.25
GGA3-213ENST00000582486 UPF3BQ9BZI7 483 aaKnown RBP13.49□□□□□ -0.25
GGA3-213ENST00000582486 NYXQ9GZU5 481 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 LRP5O75197 1615 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 LAMB2P55268 1798 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
GGA3-213ENST00000582486 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
GGA3-213ENST00000582486 PUM3Q15397 648 aaKnown RBP13.48□□□□□ -0.25
GGA3-213ENST00000582486 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 SLC27A3Q5K4L6 730 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 SNAP23O00161 211 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 FGFR2P21802 821 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 LPIN2Q92539 896 aa13.48□□□□□ -0.25
GGA3-213ENST00000582486 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
GGA3-213ENST00000582486 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
GGA3-213ENST00000582486 DDIT3P35638 169 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 ZAP70P43403 619 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 KCNJ4P48050 445 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 MCMDC2Q4G0Z9 681 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 PI16Q6UXB8 463 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 TPTE2Q6XPS3 522 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
GGA3-213ENST00000582486 CHMP5Q9NZZ3 219 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 MCAMP43121 646 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 COL4A1P02462 1669 aa13.47□□□□□ -0.25
GGA3-213ENST00000582486 ADRA2BP18089 450 aa13.46□□□□□ -0.25
GGA3-213ENST00000582486 CCDC102BQ68D86 513 aa13.46□□□□□ -0.25
GGA3-213ENST00000582486 PROM2Q8N271 834 aa13.46□□□□□ -0.25
GGA3-213ENST00000582486 KCNB2Q92953 911 aa13.46□□□□□ -0.25
GGA3-213ENST00000582486 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
GGA3-213ENST00000582486 PHKA1P46020 1223 aa13.46□□□□□ -0.26
GGA3-213ENST00000582486 CHRNDQ07001 517 aa13.46□□□□□ -0.26
GGA3-213ENST00000582486 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.26
GGA3-213ENST00000582486 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.26
GGA3-213ENST00000582486 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.26
GGA3-213ENST00000582486 NLRP3Q96P20 1036 aa13.46□□□□□ -0.26
GGA3-213ENST00000582486 RNF113AO15541 343 aaKnown RBP13.45□□□□□ -0.26
GGA3-213ENST00000582486 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
GGA3-213ENST00000582486 SLC5A1P13866 664 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 MCM2P49736 904 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 NFIXQ14938 502 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 TXNRD1Q16881 649 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 ADCK5Q3MIX3 580 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
GGA3-213ENST00000582486 SSFA2P28290 1259 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 RXRBP28702 533 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 ZMYM1Q5SVZ6 1142 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
GGA3-213ENST00000582486 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
GGA3-213ENST00000582486 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
GGA3-213ENST00000582486 TAF1P21675 1872 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms