RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 SLC10A5Q5PT55 438 aa10.12□□□□□ -0.79
CCDC47-205ENST00000582331 DLK2Q6UY11 383 aa10.12□□□□□ -0.79
CCDC47-205ENST00000582331 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
CCDC47-205ENST00000582331 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
CCDC47-205ENST00000582331 GBA2Q9HCG7 927 aaPredicted RBP10.12□□□□□ -0.79
CCDC47-205ENST00000582331 ABCC4O15439 1325 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
CCDC47-205ENST00000582331 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC47-205ENST00000582331 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 GIGYF2Q6Y7W6 1299 aaKnown RBP10.11□□□□□ -0.79
CCDC47-205ENST00000582331 KRT26Q7Z3Y9 468 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 CTU1Q7Z7A3 348 aaKnown RBP10.11□□□□□ -0.79
CCDC47-205ENST00000582331 MICALL2Q8IY33 904 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
CCDC47-205ENST00000582331 DPF2Q92785 391 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 OTUD5Q96G74 571 aa10.11□□□□□ -0.79
CCDC47-205ENST00000582331 PDE4DIPQ5VU43 2346 aa10.1□□□□□ -0.79
CCDC47-205ENST00000582331 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
CCDC47-205ENST00000582331 SEC24BO95487 1268 aa10.1□□□□□ -0.79
CCDC47-205ENST00000582331 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-205ENST00000582331 SAMD7Q7Z3H4 446 aa10.1□□□□□ -0.79
CCDC47-205ENST00000582331 DCPSQ96C86 337 aaKnown RBP10.1□□□□□ -0.79
CCDC47-205ENST00000582331 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
CCDC47-205ENST00000582331 UTP14AQ9BVJ6 771 aaKnown RBP10.1□□□□□ -0.79
CCDC47-205ENST00000582331 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-205ENST00000582331 PCDHB8Q9UN66 801 aa10.1□□□□□ -0.79
CCDC47-205ENST00000582331 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
CCDC47-205ENST00000582331 EIF4A1P60842 406 aaKnown RBP10.09□□□□□ -0.79
CCDC47-205ENST00000582331 TBC1D10BQ4KMP7 808 aaPredicted RBP10.09□□□□□ -0.79
CCDC47-205ENST00000582331 RBM26Q5T8P6 1007 aaKnown RBP10.09□□□□□ -0.79
CCDC47-205ENST00000582331 DDX46Q7L014 1031 aaKnown RBP10.09□□□□□ -0.79
CCDC47-205ENST00000582331 HPS5Q9UPZ3 1129 aa10.09□□□□□ -0.79
CCDC47-205ENST00000582331 ADM5C9JUS6 153 aa10.08□□□□□ -0.8
CCDC47-205ENST00000582331 PSMD14O00487 310 aa10.08□□□□□ -0.8
CCDC47-205ENST00000582331 SLC10A3P09131 477 aa10.08□□□□□ -0.8
CCDC47-205ENST00000582331 PKN2Q16513 984 aaKnown RBP10.08□□□□□ -0.8
CCDC47-205ENST00000582331 POTEFA5A3E0 1075 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 RPS12P25398 132 aaKnown RBP10.07□□□□□ -0.8
CCDC47-205ENST00000582331 GRAPQ13588 217 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 WASHC4Q2M389 1173 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 TMC4Q7Z404 712 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 SULF1Q8IWU6 871 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 GRAPLQ8TC17 118 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-205ENST00000582331 GCC1Q96CN9 775 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 AKAP11Q9UKA4 1901 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
CCDC47-205ENST00000582331 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
CCDC47-205ENST00000582331 EGFRP00533 1210 aa10.06□□□□□ -0.8
CCDC47-205ENST00000582331 NEFMP07197 916 aa10.06□□□□□ -0.8
CCDC47-205ENST00000582331 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
CCDC47-205ENST00000582331 THUMPD2Q9BTF0 503 aaKnown RBP10.06□□□□□ -0.8
CCDC47-205ENST00000582331 DBNDD1Q9H9R9 158 aa10.06□□□□□ -0.8
CCDC47-205ENST00000582331 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
CCDC47-205ENST00000582331 HSP90AB3PQ58FF7 597 aa10.05□□□□□ -0.8
CCDC47-205ENST00000582331 NLRP10Q86W26 655 aa10.05□□□□□ -0.8
CCDC47-205ENST00000582331 NSFL1CQ9UNZ2 370 aaKnown RBP10.05□□□□□ -0.8
CCDC47-205ENST00000582331 EIF2S2P20042 333 aaKnown RBP10.04□□□□□ -0.8
CCDC47-205ENST00000582331 DOK7Q18PE1 504 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 RASAL3Q86YV0 1011 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 ZNF296Q8WUU4 475 aaPredicted RBP10.04□□□□□ -0.8
CCDC47-205ENST00000582331 CDCA5Q96FF9 252 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 SCUBE2Q9NQ36 999 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 KCNQ5Q9NR82 932 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 GGA3Q9NZ52 723 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
CCDC47-205ENST00000582331 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
CCDC47-205ENST00000582331 POLR2AP24928 1970 aaKnown RBP10.04□□□□□ -0.8
CCDC47-205ENST00000582331 SH3TC1Q8TE82 1336 aa10.04□□□□□ -0.8
CCDC47-205ENST00000582331 ANKRD36CQ5JPF3 1778 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 ECE2O60344 883 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 TBC1D8O95759 1140 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 PPP2R1AP30153 589 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 FKBP1BP68106 108 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 PDIA6Q15084 440 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 EYA3Q99504 573 aa10.03□□□□□ -0.8
CCDC47-205ENST00000582331 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-205ENST00000582331 DUOX1Q9NRD9 1551 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 LAMB2P55268 1798 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 ANXA1P04083 346 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 VIL1P09327 827 aaKnown RBP10.02□□□□□ -0.81
CCDC47-205ENST00000582331 GPSM2P81274 684 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 AIMP1Q12904 312 aaKnown RBP10.02□□□□□ -0.81
CCDC47-205ENST00000582331 TCIRG1Q13488 830 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 FBXO46Q6PJ61 603 aaPredicted RBP10.02□□□□□ -0.81
CCDC47-205ENST00000582331 COPS6Q7L5N1 327 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 ZC3H12CQ9C0D7 883 aaKnown RBP10.02□□□□□ -0.81
CCDC47-205ENST00000582331 POLLQ9UGP5 575 aa10.02□□□□□ -0.81
CCDC47-205ENST00000582331 RTL9Q8NET4 1388 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 G3V3G9 751 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 GPR25O00155 361 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 PLCG2P16885 1265 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 SCARF1Q14162 830 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 PROSER3Q2NL68 480 aa10.01□□□□□ -0.81
CCDC47-205ENST00000582331 NOM1Q5C9Z4 860 aaKnown RBP10.01□□□□□ -0.81
CCDC47-205ENST00000582331 HABP4Q5JVS0 413 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms