RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 EBAG9O00559 213 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 MXRA7P84157 204 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 OTUD6BQ8N6M0 293 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 KRT86O43790 486 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 ZPR1O75312 459 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 HDXQ7Z353 690 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 CCDC77Q9BR77 488 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 CNNM2Q9H8M5 875 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 UQCRFS1P1P0C7P4 283 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 SYT10Q6XYQ8 523 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 TSGA10Q9BZW7 698 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 MMRN2Q9H8L6 949 aa16.54■□□□□ 0.24
CSNK1D-217ENST00000581241 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 ACTN2P35609 894 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 ANKRD44Q8N8A2 993 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 ZFYP08048 801 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 RTN1Q16799 776 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 HSP90AA4PQ58FG1 418 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 NUTM2BA6NNL0 878 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 NUTM2EB1AL46 878 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 PSMA7O14818 248 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 IRX3P78415 501 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 DAAM2Q86T65 1068 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 NUTM2AQ8IVF1 878 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 ERMNQ8TAM6 284 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 CAPZA3Q96KX2 299 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-217ENST00000581241 IQCGQ9H095 443 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-217ENST00000581241 KRT13P13646 458 aa16.52■□□□□ 0.24
CSNK1D-217ENST00000581241 ZNF569Q5MCW4 686 aa16.52■□□□□ 0.24
CSNK1D-217ENST00000581241 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
CSNK1D-217ENST00000581241 KIF5AQ12840 1032 aa16.52■□□□□ 0.24
CSNK1D-217ENST00000581241 SPTLC2O15270 562 aa16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 KARSQ15046 597 aaKnown RBP16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 FAM76AQ8TAV0 307 aa16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 SPAG5Q96R06 1193 aa16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 SNRKQ9NRH2 765 aa16.52■□□□□ 0.23
CSNK1D-217ENST00000581241 TUBBP07437 444 aa16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 POGZQ7Z3K3 1410 aa16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 LRRC2Q9BYS8 371 aa16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
CSNK1D-217ENST00000581241 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 IFNKQ9P0W0 207 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 BICDL2A1A5D9 508 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 BAG3O95817 575 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 UBXN1Q04323 297 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 DHX58Q96C10 678 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 INTS4Q96HW7 963 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 RASSF4Q9H2L5 321 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 RHOXF2BP0C7M4 288 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 CEP57Q86XR8 500 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 MEIS3Q99687 375 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 RHOXF2Q9BQY4 288 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 LDHCP07864 332 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 COMMD10Q9Y6G5 202 aa16.5■□□□□ 0.23
CSNK1D-217ENST00000581241 AK2P54819 239 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 CFAP57Q96MR6 1250 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 NOS1P29475 1434 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 GSTO1P78417 241 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 NESP48681 1621 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 CCDC114Q96M63 670 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 GUCA1BQ9UMX6 200 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 BICD1Q96G01 975 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 LZTFL1Q9NQ48 299 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 RTL9Q8NET4 1388 aa16.49■□□□□ 0.23
CSNK1D-217ENST00000581241 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 ASIC1P78348 528 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 RSRC1Q96IZ7 334 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 SMC6Q96SB8 1091 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 KRT2P35908 639 aa16.48■□□□□ 0.23
CSNK1D-217ENST00000581241 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms