RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 ZNF589Q86UQ0 364 aaPredicted RBP10□□□□□ -0.81
RIOK3-204ENST00000581220 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
RIOK3-204ENST00000581220 IP6K1Q92551 441 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 DDX11Q96FC9 970 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 TLR7Q9NYK1 1049 aaKnown RBP10□□□□□ -0.81
RIOK3-204ENST00000581220 TBX22Q9Y458 520 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 TAF6LQ9Y6J9 622 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 KINO60870 393 aaKnown RBP10□□□□□ -0.81
RIOK3-204ENST00000581220 C1orf141Q5JVX7 400 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 TAF3Q5VWG9 929 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 NBPF6Q5VWK0 638 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 USPL1Q5W0Q7 1092 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 NBPF4Q96M43 638 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 ANO10Q9NW15 660 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 MORC2Q9Y6X9 1032 aaPredicted RBP10□□□□□ -0.81
RIOK3-204ENST00000581220 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
RIOK3-204ENST00000581220 LRP6O75581 1613 aa10□□□□□ -0.81
RIOK3-204ENST00000581220 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 IGSF3O75054 1194 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 NAA30Q147X3 362 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 C11orf57Q6ZUT1 292 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 ZNF397Q8NF99 534 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 ZNF396Q96N95 335 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 LLPHQ9BRT6 129 aaKnown RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 NAT10Q9H0A0 1025 aaKnown RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 SLIT1O75093 1534 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 UTYO14607 1347 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 CCDC69A6NI79 296 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 KIF2AO00139 706 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 PROSER3Q2NL68 480 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 FILIP1Q7Z7B0 1213 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 THEMISQ8N1K5 641 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 KIF18AQ8NI77 898 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 NGLY1Q96IV0 654 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
RIOK3-204ENST00000581220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.99□□□□□ -0.81
RIOK3-204ENST00000581220 RNMTO43148 476 aaKnown RBP9.98□□□□□ -0.81
RIOK3-204ENST00000581220 GSDMDP57764 484 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 AIMP1Q12904 312 aaKnown RBP9.98□□□□□ -0.81
RIOK3-204ENST00000581220 ATL3Q6DD88 541 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 NAA16Q6N069 864 aaPredicted RBP9.98□□□□□ -0.81
RIOK3-204ENST00000581220 CEP57L1Q8IYX8 460 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 KRT222Q8N1A0 295 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 ERO1AQ96HE7 468 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 MARF1Q9Y4F3 1742 aaKnown RBP9.98□□□□□ -0.81
RIOK3-204ENST00000581220 LTN1O94822 1766 aa9.98□□□□□ -0.81
RIOK3-204ENST00000581220 USP54Q70EL1 1684 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
RIOK3-204ENST00000581220 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 NYAP1Q6ZVC0 841 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 USP16Q9Y5T5 823 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 BCL9LQ86UU0 1499 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 USP27XA6NNY8 438 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 ATP5JP18859 108 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 SCRN1Q12765 414 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 ZRSR1Q15695 479 aaKnown RBP9.97□□□□□ -0.81
RIOK3-204ENST00000581220 SMARCC2Q8TAQ2 1214 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
RIOK3-204ENST00000581220 TRMT1Q9NXH9 659 aaKnown RBP9.97□□□□□ -0.81
RIOK3-204ENST00000581220 ZNF215Q9UL58 517 aaPredicted RBP9.97□□□□□ -0.81
RIOK3-204ENST00000581220 LMO7Q8WWI1 1683 aa9.97□□□□□ -0.81
RIOK3-204ENST00000581220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.81
RIOK3-204ENST00000581220 PFKFB2O60825 505 aa9.96□□□□□ -0.81
RIOK3-204ENST00000581220 ME1P48163 572 aa9.96□□□□□ -0.81
RIOK3-204ENST00000581220 FAM160A1Q05DH4 1040 aa9.96□□□□□ -0.81
RIOK3-204ENST00000581220 MCMDC2Q4G0Z9 681 aa9.96□□□□□ -0.81
RIOK3-204ENST00000581220 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.81
RIOK3-204ENST00000581220 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.81
RIOK3-204ENST00000581220 DDX21Q9NR30 783 aaKnown RBP eCLIP9.96□□□□□ -0.81
RIOK3-204ENST00000581220 DCAF8L1A6NGE4 600 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 NRDCO43847 1150 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 SLU7O95391 586 aaKnown RBP9.96□□□□□ -0.82
RIOK3-204ENST00000581220 FOSBP53539 338 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 CCZ1BP86790 482 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
RIOK3-204ENST00000581220 DHX40Q8IX18 779 aaKnown RBP9.96□□□□□ -0.82
RIOK3-204ENST00000581220 KLHDC4Q8TBB5 520 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 CHMP4CQ96CF2 233 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 GOLPH3LQ9H4A5 285 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 IMPACTQ9P2X3 320 aa9.96□□□□□ -0.82
RIOK3-204ENST00000581220 CYP21A2P08686 494 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 ADD1P35611 737 aaKnown RBP9.95□□□□□ -0.82
RIOK3-204ENST00000581220 SNW1Q13573 536 aaKnown RBP9.95□□□□□ -0.82
RIOK3-204ENST00000581220 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 AOPEPQ8N6M6 819 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 FSIP1Q8NA03 581 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 NSUN7Q8NE18 718 aaKnown RBP9.95□□□□□ -0.82
RIOK3-204ENST00000581220 DNAJC2Q99543 621 aaKnown RBP9.95□□□□□ -0.82
RIOK3-204ENST00000581220 SDF4Q9BRK5 362 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 LRRC2Q9BYS8 371 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 KCND1Q9NSA2 647 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 MYH15Q9Y2K3 1946 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 RFX7Q2KHR2 1363 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
RIOK3-204ENST00000581220 DHX8Q14562 1220 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms