RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 DDR1Q08345 913 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 PROSER3Q2NL68 480 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 ZNF790Q6PG37 636 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 PCDH10Q9P2E7 1040 aa9.76□□□□□ -0.85
RFFL-207ENST00000580569 DBF4Q9UBU7 674 aaPredicted RBP9.76□□□□□ -0.85
RFFL-207ENST00000580569 ANKRD31Q8N7Z5 1873 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 PNMA6EA0A0J9YXQ4 647 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 A6NJR5 290 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 POLRMTO00411 1230 aaKnown RBP9.75□□□□□ -0.85
RFFL-207ENST00000580569 TRAK2O60296 914 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 HMMRO75330 724 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 ANXA1P04083 346 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 HSP90AB1P08238 724 aaKnown RBP9.75□□□□□ -0.85
RFFL-207ENST00000580569 OSBPP22059 807 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 CHRNA5P30532 468 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 HIC1Q14526 733 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 MICALL2Q8IY33 904 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 SSH3Q8TE77 659 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
RFFL-207ENST00000580569 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
RFFL-207ENST00000580569 CACNA1SQ13698 1873 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 PI4KAP2A4QPH2 592 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 RASSF7Q02833 373 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 SLC39A6Q13433 755 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 TTC22Q5TAA0 569 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 KSR2Q6VAB6 950 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 PI4KAP1Q8N8J0 262 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
RFFL-207ENST00000580569 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 HYPKQ9NX55 129 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 LRRFIP2Q9Y608 721 aaKnown RBP9.74□□□□□ -0.85
RFFL-207ENST00000580569 UTYO14607 1347 aa9.74□□□□□ -0.85
RFFL-207ENST00000580569 FOXN1O15353 648 aa9.73□□□□□ -0.85
RFFL-207ENST00000580569 SMARCA5O60264 1052 aaPredicted RBP9.73□□□□□ -0.85
RFFL-207ENST00000580569 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
RFFL-207ENST00000580569 RBM25P49756 843 aaKnown RBP9.73□□□□□ -0.85
RFFL-207ENST00000580569 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
RFFL-207ENST00000580569 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
RFFL-207ENST00000580569 ZNF496Q96IT1 587 aaPredicted RBP9.73□□□□□ -0.85
RFFL-207ENST00000580569 PCMTD1Q96MG8 357 aaPredicted RBP9.73□□□□□ -0.85
RFFL-207ENST00000580569 SRP68Q9UHB9 627 aaKnown RBP9.73□□□□□ -0.85
RFFL-207ENST00000580569 CNTNAP1P78357 1384 aa9.73□□□□□ -0.85
RFFL-207ENST00000580569 PDE4DIPQ5VU43 2346 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 ALDH1L1O75891 902 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
RFFL-207ENST00000580569 UBTFL1P0CB47 393 aaPredicted RBP9.72□□□□□ -0.85
RFFL-207ENST00000580569 MTX1Q13505 466 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
RFFL-207ENST00000580569 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 C22orf23Q9BZE7 217 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 ANKRD36CQ5JPF3 1778 aa9.72□□□□□ -0.85
RFFL-207ENST00000580569 TTLL13PA6NNM8 815 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 NFKBIEO00221 500 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 SLC4A3P48751 1232 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 CTCFP49711 727 aaPredicted RBP9.71□□□□□ -0.86
RFFL-207ENST00000580569 TTLL6Q8N841 843 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 KIF2CQ99661 725 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 STAP2Q9UGK3 403 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 MAP3K2Q9Y2U5 619 aa9.71□□□□□ -0.86
RFFL-207ENST00000580569 COL11A2P13942 1736 aaPredicted RBP9.7□□□□□ -0.86
RFFL-207ENST00000580569 NUP98P52948 1817 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 CDC45O75419 566 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 IGKV5-2P06315 115 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 SNRPA1P09661 255 aaKnown RBP9.7□□□□□ -0.86
RFFL-207ENST00000580569 PDE1AP54750 535 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
RFFL-207ENST00000580569 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
RFFL-207ENST00000580569 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 LINS1Q8NG48 757 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 KAZALD1Q96I82 304 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 UPF2Q9HAU5 1272 aaKnown RBP9.7□□□□□ -0.86
RFFL-207ENST00000580569 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
RFFL-207ENST00000580569 EXOC6BQ9Y2D4 811 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 PASKQ96RG2 1323 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 ADAMTSL1Q8N6G6 1762 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 MYH3P11055 1940 aa9.7□□□□□ -0.86
RFFL-207ENST00000580569 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 PTCD1O75127 700 aaKnown RBP9.69□□□□□ -0.86
RFFL-207ENST00000580569 ZPR1O75312 459 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 SDSP20132 328 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 TIE1P35590 1138 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 COL15A1P39059 1388 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 CABP4P57796 275 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 MCM6Q14566 821 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 DDX12PQ92771 950 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 TBC1D2Q9BYX2 928 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 LRRCC1Q9C099 1032 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 LTBP3Q9NS15 1303 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
RFFL-207ENST00000580569 TRPM7Q96QT4 1865 aa9.68□□□□□ -0.86
RFFL-207ENST00000580569 THSD7BQ9C0I4 1608 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms