RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
ITGB4-207ENST00000580542 GOLGA5Q8TBA6 731 aa16.08■□□□□ 0.16
ITGB4-207ENST00000580542 INTS4Q96HW7 963 aaKnown RBP16.08■□□□□ 0.16
ITGB4-207ENST00000580542 GLI3P10071 1580 aa16.08■□□□□ 0.16
ITGB4-207ENST00000580542 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
ITGB4-207ENST00000580542 PALD1Q9ULE6 856 aa16.07■□□□□ 0.16
ITGB4-207ENST00000580542 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
ITGB4-207ENST00000580542 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-207ENST00000580542 CCDC91Q7Z6B0 441 aa16.07■□□□□ 0.16
ITGB4-207ENST00000580542 AK7Q96M32 723 aa16.07■□□□□ 0.16
ITGB4-207ENST00000580542 ZCCHC17Q9NP64 241 aaKnown RBP16.07■□□□□ 0.16
ITGB4-207ENST00000580542 ARGLU1Q9NWB6 273 aaPredicted RBP16.07■□□□□ 0.16
ITGB4-207ENST00000580542 TRMT1Q9NXH9 659 aaKnown RBP16.07■□□□□ 0.16
ITGB4-207ENST00000580542 UBR2Q8IWV8 1755 aa16.07■□□□□ 0.16
ITGB4-207ENST00000580542 SLIT2O94813 1529 aa16.06■□□□□ 0.16
ITGB4-207ENST00000580542 CXorf56Q9H5V9 222 aa16.06■□□□□ 0.16
ITGB4-207ENST00000580542 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
ITGB4-207ENST00000580542 ARHGAP29Q52LW3 1261 aa16.06■□□□□ 0.16
ITGB4-207ENST00000580542 DCAF5Q96JK2 942 aa16.06■□□□□ 0.16
ITGB4-207ENST00000580542 IL2RBP14784 551 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 TOGARAM1Q9Y4F4 1720 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 LRP6O75581 1613 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 RAD50Q92878 1312 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 ZNF75DP51815 510 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 TEFQ10587 303 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 LRRCC1Q9C099 1032 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 DONSONQ9NYP3 566 aa16.05■□□□□ 0.16
ITGB4-207ENST00000580542 OAS2P29728 719 aaKnown RBP16.04■□□□□ 0.16
ITGB4-207ENST00000580542 LMAN1P49257 510 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 TCHHQ07283 1943 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 MAGEA9P43362 315 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 CHMLP26374 656 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
ITGB4-207ENST00000580542 C5P01031 1676 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 SATB1Q01826 763 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 FLIIQ13045 1269 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
ITGB4-207ENST00000580542 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 TDO2P48775 406 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.03■□□□□ 0.16
ITGB4-207ENST00000580542 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
ITGB4-207ENST00000580542 ATP8B2P98198 1209 aa16.02■□□□□ 0.16
ITGB4-207ENST00000580542 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
ITGB4-207ENST00000580542 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
ITGB4-207ENST00000580542 ANO2Q9NQ90 1003 aa16.02■□□□□ 0.16
ITGB4-207ENST00000580542 SUFUQ9UMX1 484 aa16.02■□□□□ 0.16
ITGB4-207ENST00000580542 JCADQ9P266 1359 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.15
ITGB4-207ENST00000580542 GNAI3P08754 354 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 EVA1CP58658 441 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 ANAPC15P60006 121 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 EGFL6Q8IUX8 553 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 RILPL2Q969X0 211 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.15
ITGB4-207ENST00000580542 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
ITGB4-207ENST00000580542 SKILP12757 684 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 MCCP23508 829 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 UNC5CLQ8IV45 518 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 LRRC8AQ8IWT6 810 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 RPAP1Q9BWH6 1393 aaPredicted RBP16.01■□□□□ 0.15
ITGB4-207ENST00000580542 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
ITGB4-207ENST00000580542 TYRO3Q06418 890 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 LEKR1Q6ZMV7 388 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 IL17RAQ96F46 866 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 STRN4Q9NRL3 753 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
ITGB4-207ENST00000580542 KCNQ3O43525 872 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 CAMK4Q16566 473 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
ITGB4-207ENST00000580542 CBX8Q9HC52 389 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 SEC31AO94979 1220 aaKnown RBP16■□□□□ 0.15
ITGB4-207ENST00000580542 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
ITGB4-207ENST00000580542 SMC1AQ14683 1233 aaKnown RBP16■□□□□ 0.15
ITGB4-207ENST00000580542 MAP3K11Q16584 847 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 NECTIN2Q92692 538 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 IL25Q9H293 177 aa16■□□□□ 0.15
ITGB4-207ENST00000580542 ACTN2P35609 894 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 ARID5BQ14865 1188 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 ANO6Q4KMQ2 910 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 MNS1Q8NEH6 495 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 UBXN4Q92575 508 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 CCDC34Q96HJ3 373 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
ITGB4-207ENST00000580542 KIF1CO43896 1103 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms