RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 WTIPA6NIX2 430 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-213ENST00000580446 GRAPQ13588 217 aa18.89■□□□□ 0.61
CSNK1D-213ENST00000580446 DDX46Q7L014 1031 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-213ENST00000580446 GRAPLQ8TC17 118 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-213ENST00000580446 ZNF333Q96JL9 665 aa18.89■□□□□ 0.61
CSNK1D-213ENST00000580446 UTP14AQ9BVJ6 771 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-213ENST00000580446 GPSM2P81274 684 aa18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 PPP1R42Q7Z4L9 355 aa18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 DPF3Q92784 378 aa18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 COL25A1Q9BXS0 654 aaPredicted RBP18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 NUP98P52948 1817 aa18.88■□□□□ 0.61
CSNK1D-213ENST00000580446 IGF2BP3O00425 579 aaKnown RBP eCLIP18.87■□□□□ 0.61
CSNK1D-213ENST00000580446 IFNL1Q8IU54 200 aa18.87■□□□□ 0.61
CSNK1D-213ENST00000580446 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
CSNK1D-213ENST00000580446 VIL1P09327 827 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-213ENST00000580446 ZNF280AP59817 542 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-213ENST00000580446 SLC10A5Q5PT55 438 aa18.86■□□□□ 0.61
CSNK1D-213ENST00000580446 SPRYD7Q5W111 196 aa18.86■□□□□ 0.61
CSNK1D-213ENST00000580446 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
CSNK1D-213ENST00000580446 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-213ENST00000580446 COL4A1P02462 1669 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 PITPNM2Q9BZ72 1349 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 NBPF9Q3BBW0 867 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 MYOZ2Q9NPC6 264 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 PTCH2Q9Y6C5 1203 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 TAF1P21675 1872 aa18.85■□□□□ 0.61
CSNK1D-213ENST00000580446 CRHR2Q13324 411 aa18.84■□□□□ 0.61
CSNK1D-213ENST00000580446 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-213ENST00000580446 CELF1Q92879 486 aaKnown RBP18.84■□□□□ 0.61
CSNK1D-213ENST00000580446 SLC9C1Q4G0N8 1177 aa18.83■□□□□ 0.6
CSNK1D-213ENST00000580446 SH3TC2Q8TF17 1288 aa18.83■□□□□ 0.6
CSNK1D-213ENST00000580446 PRO3102Q9H379 93 aa18.83■□□□□ 0.6
CSNK1D-213ENST00000580446 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
CSNK1D-213ENST00000580446 ALDH1A1P00352 501 aa18.82■□□□□ 0.6
CSNK1D-213ENST00000580446 PARP10Q53GL7 1025 aa18.82■□□□□ 0.6
CSNK1D-213ENST00000580446 LAMB2P55268 1798 aa18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 SCN9AQ15858 1988 aa18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 Q7L0L9 218 aa18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 CLMNQ96JQ2 1002 aa18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 MXD3Q9BW11 206 aa18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 ANGEL1Q9UNK9 670 aaKnown RBP18.81■□□□□ 0.6
CSNK1D-213ENST00000580446 ANXA1P04083 346 aa18.8■□□□□ 0.6
CSNK1D-213ENST00000580446 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-213ENST00000580446 TBC1D16Q8TBP0 767 aa18.8■□□□□ 0.6
CSNK1D-213ENST00000580446 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
CSNK1D-213ENST00000580446 LAMB4A4D0S4 1761 aa18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 G3V3G9 751 aa18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 USP17L8P0C7I0 530 aa18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 DCAF8Q5TAQ9 597 aa18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 SHISA4Q96DD7 197 aa18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 LRRC37AA6NMS7 1700 aa18.79■□□□□ 0.6
CSNK1D-213ENST00000580446 MANSC4A6NHS7 340 aaPredicted RBP18.78■□□□□ 0.6
CSNK1D-213ENST00000580446 SASH1O94885 1247 aa18.78■□□□□ 0.6
CSNK1D-213ENST00000580446 NF2P35240 595 aa18.78■□□□□ 0.6
CSNK1D-213ENST00000580446 SP3Q02447 781 aa18.78■□□□□ 0.6
CSNK1D-213ENST00000580446 TRMT112Q9UI30 125 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-213ENST00000580446 LAMA3Q16787 3333 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 LDLRAD1Q5T700 205 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 NLRP10Q86W26 655 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 GMLQ99445 158 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 EYA3Q99504 573 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.6
CSNK1D-213ENST00000580446 UNC80Q8N2C7 3258 aa18.76■□□□□ 0.59
CSNK1D-213ENST00000580446 UFL1O94874 794 aa18.76■□□□□ 0.59
CSNK1D-213ENST00000580446 PROSER3Q2NL68 480 aa18.76■□□□□ 0.59
CSNK1D-213ENST00000580446 AGBL3Q8NEM8 1001 aa18.76■□□□□ 0.59
CSNK1D-213ENST00000580446 WNK4Q96J92 1243 aa18.76■□□□□ 0.59
CSNK1D-213ENST00000580446 ZC3H12CQ9C0D7 883 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-213ENST00000580446 TAF7Q15545 349 aaPredicted RBP18.75■□□□□ 0.59
CSNK1D-213ENST00000580446 SLC10A4Q96EP9 437 aa18.75■□□□□ 0.59
CSNK1D-213ENST00000580446 GJA5P36382 358 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 MTFR1Q15390 333 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 TMC4Q7Z404 712 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 NBPF11Q86T75 865 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 DEFB123Q8N688 67 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 PTPN18Q99952 460 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
CSNK1D-213ENST00000580446 HSPA5P11021 654 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-213ENST00000580446 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-213ENST00000580446 ARHGAP39Q9C0H5 1083 aa18.73■□□□□ 0.59
CSNK1D-213ENST00000580446 STAP2Q9UGK3 403 aa18.73■□□□□ 0.59
CSNK1D-213ENST00000580446 WNT10BO00744 389 aa18.72■□□□□ 0.59
CSNK1D-213ENST00000580446 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
CSNK1D-213ENST00000580446 DDX60Q8IY21 1712 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-213ENST00000580446 ANKRD36CQ5JPF3 1778 aa18.71■□□□□ 0.59
CSNK1D-213ENST00000580446 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
CSNK1D-213ENST00000580446 AIMP1Q12904 312 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-213ENST00000580446 LRP10Q7Z4F1 713 aa18.71■□□□□ 0.59
CSNK1D-213ENST00000580446 FBXW7Q969H0 707 aa18.71■□□□□ 0.59
CSNK1D-213ENST00000580446 INHBEP58166 350 aa18.7■□□□□ 0.58
CSNK1D-213ENST00000580446 SSC5DA1L4H1 1573 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms