RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 SOWAHBA6NEL2 793 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
RNF43-204ENST00000580014 CYP19A1P11511 503 aaPredicted RBP9.18□□□□□ -0.94
RNF43-204ENST00000580014 RARSP54136 660 aaKnown RBP9.18□□□□□ -0.94
RNF43-204ENST00000580014 ITPK1Q13572 414 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
RNF43-204ENST00000580014 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 VIRMAQ69YN4 1812 aaKnown RBP9.18□□□□□ -0.94
RNF43-204ENST00000580014 LRP10Q7Z4F1 713 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 LRRN4Q8WUT4 740 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 SLC27A5Q9Y2P5 690 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
RNF43-204ENST00000580014 RNF123Q5XPI4 1314 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 PRAMEF22A3QJZ6 481 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 ELL2O00472 640 aaPredicted RBP9.17□□□□□ -0.94
RNF43-204ENST00000580014 HMGB2P26583 209 aaKnown RBP9.17□□□□□ -0.94
RNF43-204ENST00000580014 PPP4CP60510 307 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
RNF43-204ENST00000580014 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 DNAJC10Q8IXB1 793 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 CAMKK2Q96RR4 588 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 BTAF1O14981 1849 aa9.17□□□□□ -0.94
RNF43-204ENST00000580014 STARD3NLO95772 234 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 APBA3O96018 575 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 IRF5Q13568 498 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 HDGFL1Q5TGJ6 251 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 CCDC30Q5VVM6 783 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 LRRC4BQ9NT99 713 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 RCAN3Q9UKA8 241 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
RNF43-204ENST00000580014 CNTNAP4Q9C0A0 1308 aa9.15□□□□□ -0.94
RNF43-204ENST00000580014 LY75O60449 1722 aa9.15□□□□□ -0.94
RNF43-204ENST00000580014 TNS1Q9HBL0 1735 aaKnown RBP9.15□□□□□ -0.94
RNF43-204ENST00000580014 TXNRD1Q16881 649 aa9.15□□□□□ -0.94
RNF43-204ENST00000580014 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
RNF43-204ENST00000580014 DESI1Q6ICB0 168 aa9.15□□□□□ -0.94
RNF43-204ENST00000580014 NBPF10Q6P3W6 841 aaKnown RBP9.15□□□□□ -0.94
RNF43-204ENST00000580014 INTS5Q6P9B9 1019 aaKnown RBP9.15□□□□□ -0.94
RNF43-204ENST00000580014 NBPF15Q8N660 670 aa9.15□□□□□ -0.94
RNF43-204ENST00000580014 DDX21Q9NR30 783 aaKnown RBP eCLIP9.15□□□□□ -0.94
RNF43-204ENST00000580014 DBF4Q9UBU7 674 aaPredicted RBP9.15□□□□□ -0.94
RNF43-204ENST00000580014 TSR3Q9UJK0 312 aaKnown RBP9.15□□□□□ -0.94
RNF43-204ENST00000580014 CCNL1Q9UK58 526 aaPredicted RBP9.15□□□□□ -0.94
RNF43-204ENST00000580014 RGPD3A6NKT7 1758 aaPredicted RBP9.14□□□□□ -0.95
RNF43-204ENST00000580014 RGPD4Q7Z3J3 1758 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 GPR37L1O60883 481 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 CENPBP07199 599 aaPredicted RBP9.14□□□□□ -0.95
RNF43-204ENST00000580014 BCAMP50895 628 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 ILDR2Q71H61 639 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 HYPKQ9NX55 129 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 TJP1Q07157 1748 aa9.14□□□□□ -0.95
RNF43-204ENST00000580014 C5P01031 1676 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 A1BGP04217 495 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 EIF2S2P20042 333 aaKnown RBP9.13□□□□□ -0.95
RNF43-204ENST00000580014 IL6STP40189 918 aaPredicted RBP9.13□□□□□ -0.95
RNF43-204ENST00000580014 CRKLP46109 303 aaKnown RBP9.13□□□□□ -0.95
RNF43-204ENST00000580014 APLP1P51693 650 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 EIF5P55010 431 aaKnown RBP9.13□□□□□ -0.95
RNF43-204ENST00000580014 WNT2BQ93097 391 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 RREB1Q92766 1687 aa9.13□□□□□ -0.95
RNF43-204ENST00000580014 RPS6KA4O75676 772 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 BCAR3O75815 825 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 BAG6P46379 1132 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 PROSER3Q2NL68 480 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 BRICD5Q6PL45 260 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 BLOC1S3Q6QNY0 202 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 RNF19BQ6ZMZ0 732 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 GLMNQ92990 594 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 CALR3Q96L12 384 aaKnown RBP9.12□□□□□ -0.95
RNF43-204ENST00000580014 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 PCDHB3Q9Y5E6 796 aa9.12□□□□□ -0.95
RNF43-204ENST00000580014 KIF16BQ96L93 1317 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 NR1I2O75469 434 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 KCNQ4P56696 695 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
RNF43-204ENST00000580014 EZH2Q15910 746 aaKnown RBP9.11□□□□□ -0.95
RNF43-204ENST00000580014 G2E3Q7L622 706 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 USB1Q9BQ65 265 aaKnown RBP9.11□□□□□ -0.95
RNF43-204ENST00000580014 SMC4Q9NTJ3 1288 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
RNF43-204ENST00000580014 COL5A3P25940 1745 aaPredicted RBP9.11□□□□□ -0.95
RNF43-204ENST00000580014 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
RNF43-204ENST00000580014 PTPRCP08575 1304 aa9.1□□□□□ -0.95
RNF43-204ENST00000580014 TCERG1O14776 1098 aaKnown RBP9.1□□□□□ -0.95
RNF43-204ENST00000580014 IPO8O15397 1037 aaKnown RBP9.1□□□□□ -0.95
RNF43-204ENST00000580014 FMNL1O95466 1100 aaPredicted RBP9.1□□□□□ -0.95
RNF43-204ENST00000580014 NR6A1Q15406 480 aa9.1□□□□□ -0.95
RNF43-204ENST00000580014 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
RNF43-204ENST00000580014 DEFB132Q7Z7B7 95 aa9.1□□□□□ -0.95
RNF43-204ENST00000580014 THAP11Q96EK4 314 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms