RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 FAM205AQ6ZU69 1335 aa8.47□□□□□ -1.05
CCDC178-209ENST00000579947 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
CCDC178-209ENST00000579947 MAGEA10P43363 369 aaPredicted RBP8.47□□□□□ -1.05
CCDC178-209ENST00000579947 ZNF330Q9Y3S2 320 aaPredicted RBP8.47□□□□□ -1.05
CCDC178-209ENST00000579947 MRE11P49959 708 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 SCARF1Q14162 830 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 TTLL12Q14166 644 aaPredicted RBP8.46□□□□□ -1.06
CCDC178-209ENST00000579947 ARMC9Q7Z3E5 817 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.06
CCDC178-209ENST00000579947 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.06
CCDC178-209ENST00000579947 CCL5P13501 91 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 FOXK2Q01167 660 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 NIP7Q9Y221 180 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC178-209ENST00000579947 HEG1Q9ULI3 1381 aa8.46□□□□□ -1.06
CCDC178-209ENST00000579947 LRRC37AA6NMS7 1700 aa8.45□□□□□ -1.06
CCDC178-209ENST00000579947 TESPA1A2RU30 521 aaPredicted RBP8.45□□□□□ -1.06
CCDC178-209ENST00000579947 ZNF280AP59817 542 aaPredicted RBP8.45□□□□□ -1.06
CCDC178-209ENST00000579947 DPP8Q6V1X1 898 aaPredicted RBP8.45□□□□□ -1.06
CCDC178-209ENST00000579947 NPM2Q86SE8 214 aaKnown RBP8.45□□□□□ -1.06
CCDC178-209ENST00000579947 LRFN3Q9BTN0 628 aa8.45□□□□□ -1.06
CCDC178-209ENST00000579947 NF2P35240 595 aa8.45□□□□□ -1.06
CCDC178-209ENST00000579947 WNK4Q96J92 1243 aa8.45□□□□□ -1.06
CCDC178-209ENST00000579947 NYXQ9GZU5 481 aa8.45□□□□□ -1.06
CCDC178-209ENST00000579947 ADAMTS19Q8TE59 1207 aa8.44□□□□□ -1.06
CCDC178-209ENST00000579947 PPM1GO15355 546 aaPredicted RBP8.44□□□□□ -1.06
CCDC178-209ENST00000579947 C7orf61Q8IZ16 206 aa8.44□□□□□ -1.06
CCDC178-209ENST00000579947 U2AF1L4Q8WU68 220 aaKnown RBP8.44□□□□□ -1.06
CCDC178-209ENST00000579947 BRCA2P51587 3418 aa8.44□□□□□ -1.06
CCDC178-209ENST00000579947 RTL9Q8NET4 1388 aa8.44□□□□□ -1.06
CCDC178-209ENST00000579947 RNMTO43148 476 aaKnown RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 SP8Q8IXZ3 490 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 ATXN2LQ8WWM7 1075 aaKnown RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 MYLIPQ8WY64 445 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 SEMA6BQ9H3T3 888 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 ZMYND8Q9ULU4 1186 aaPredicted RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 PSME4Q14997 1843 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 TCERG1O14776 1098 aaKnown RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 SGPL1O95470 568 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 UHRF1Q96T88 793 aaPredicted RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 UNCXA6NJT0 531 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 FOSL2P15408 326 aa8.43□□□□□ -1.06
CCDC178-209ENST00000579947 SIPA1L3O60292 1781 aaPredicted RBP8.43□□□□□ -1.06
CCDC178-209ENST00000579947 A1BGP04217 495 aa8.42□□□□□ -1.06
CCDC178-209ENST00000579947 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
CCDC178-209ENST00000579947 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
CCDC178-209ENST00000579947 RNF208Q9H0X6 261 aa8.42□□□□□ -1.06
CCDC178-209ENST00000579947 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 ANKRD36CQ5JPF3 1778 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 VIL1P09327 827 aaKnown RBP8.41□□□□□ -1.06
CCDC178-209ENST00000579947 KCNA4P22459 653 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 KIF22Q14807 665 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 MAP3K11Q16584 847 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 TTC5Q8N0Z6 440 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 SLC10A4Q96EP9 437 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 ASB2Q96Q27 587 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 UBXN2AP68543 259 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 PTPN18Q99952 460 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 POLKQ9UBT6 870 aa8.41□□□□□ -1.06
CCDC178-209ENST00000579947 GRK4P32298 578 aa8.4□□□□□ -1.06
CCDC178-209ENST00000579947 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
CCDC178-209ENST00000579947 COL1A1P02452 1464 aaPredicted RBP8.4□□□□□ -1.06
CCDC178-209ENST00000579947 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
CCDC178-209ENST00000579947 LAMB2P55268 1798 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 ABCC4O15439 1325 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 BBOX1O75936 387 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 LACTBP83111 547 aaPredicted RBP8.4□□□□□ -1.07
CCDC178-209ENST00000579947 TMEM31Q5JXX7 168 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 PRAMEF18Q5VWM3 479 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 USP38Q8NB14 1042 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 ARHGAP39Q9C0H5 1083 aa8.4□□□□□ -1.07
CCDC178-209ENST00000579947 VCANP13611 3396 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 NECAB2Q7Z6G3 386 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 AGBL3Q8NEM8 1001 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 SCN9AQ15858 1988 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 LAMA3Q16787 3333 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 SYN1P17600 705 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 CRISPLD2Q9H0B8 497 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 MYOZ2Q9NPC6 264 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 SRRDQ9UH36 339 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 ANGEL1Q9UNK9 670 aaKnown RBP8.39□□□□□ -1.07
CCDC178-209ENST00000579947 RIPOR2Q9Y4F9 1068 aa8.39□□□□□ -1.07
CCDC178-209ENST00000579947 ECE2O60344 883 aa8.38□□□□□ -1.07
CCDC178-209ENST00000579947 DBNDD1Q9H9R9 158 aa8.38□□□□□ -1.07
CCDC178-209ENST00000579947 C3orf67Q6ZVT6 689 aa8.38□□□□□ -1.07
CCDC178-209ENST00000579947 ANKLE1Q8NAG6 615 aa8.38□□□□□ -1.07
CCDC178-209ENST00000579947 PAWRQ96IZ0 340 aaKnown RBP8.38□□□□□ -1.07
CCDC178-209ENST00000579947 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
CCDC178-209ENST00000579947 NUP98P52948 1817 aa8.38□□□□□ -1.07
CCDC178-209ENST00000579947 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
CCDC178-209ENST00000579947 TFRCP02786 760 aaKnown RBP8.37□□□□□ -1.07
CCDC178-209ENST00000579947 GJA5P36382 358 aa8.37□□□□□ -1.07
CCDC178-209ENST00000579947 TAF1CQ15572 869 aaPredicted RBP8.37□□□□□ -1.07
CCDC178-209ENST00000579947 AEBP1Q8IUX7 1158 aa8.37□□□□□ -1.07
CCDC178-209ENST00000579947 TTYH1Q9H313 450 aaPredicted RBP8.37□□□□□ -1.07
CCDC178-209ENST00000579947 GPR37L1O60883 481 aa8.37□□□□□ -1.07
CCDC178-209ENST00000579947 ECM2O94769 699 aaPredicted RBP8.37□□□□□ -1.07
CCDC178-209ENST00000579947 KCNQ5Q9NR82 932 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms