RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 MTMR7Q9Y216 660 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 HEG1Q9ULI3 1381 aa4.49□□□□□ -1.69
CDH19-204ENST00000579658 GPR25O00155 361 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 RNMTO43148 476 aaKnown RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 IL13P35225 146 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 TM4SF4P48230 202 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 TMC4Q7Z404 712 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 CLUAP1Q96AJ1 413 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 ARMC5Q96C12 935 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 DCPSQ96C86 337 aaKnown RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 RBM17Q96I25 401 aaKnown RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 BCL2L13Q9BXK5 485 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 RTFDC1Q9BY42 306 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 FAM117AQ9C073 453 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 ZNF408Q9H9D4 720 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 COL4A5P29400 1685 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 ZNF646O15015 1829 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 HMOX1P09601 288 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 GMPSP49915 693 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 FOXD4L5Q5VV16 416 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 RASAL3Q86YV0 1011 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 ZNF296Q8WUU4 475 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 FOXD4L4Q8WXT5 416 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 ERO1AQ96HE7 468 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 TMEM106CQ9BVX2 250 aa4.48□□□□□ -1.69
CDH19-204ENST00000579658 COLQQ9Y215 455 aaPredicted RBP4.48□□□□□ -1.69
CDH19-204ENST00000579658 LAMB4A4D0S4 1761 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 COL3A1P02461 1466 aaPredicted RBP4.47□□□□□ -1.69
CDH19-204ENST00000579658 PPIP5K2O43314 1243 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 MMP14P50281 582 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 INHBEP58166 350 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 DZIP3Q86Y13 1208 aaKnown RBP4.47□□□□□ -1.69
CDH19-204ENST00000579658 RPGRQ92834 1020 aaKnown RBP4.47□□□□□ -1.69
CDH19-204ENST00000579658 ZNF496Q96IT1 587 aaPredicted RBP4.47□□□□□ -1.69
CDH19-204ENST00000579658 PRKRIP1Q9H875 184 aaPredicted RBP4.47□□□□□ -1.69
CDH19-204ENST00000579658 ANKRD36CQ5JPF3 1778 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 PPEF1O14829 653 aaPredicted RBP4.47□□□□□ -1.69
CDH19-204ENST00000579658 RAD21O60216 631 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 USP48Q86UV5 1035 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 FMNL2Q96PY5 1086 aa4.47□□□□□ -1.69
CDH19-204ENST00000579658 UNCXA6NJT0 531 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 LRRC37AA6NMS7 1700 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 U2SURPO15042 1029 aaKnown RBP4.46□□□□□ -1.7
CDH19-204ENST00000579658 SNPHO15079 494 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 DIAPH1O60610 1272 aaKnown RBP4.46□□□□□ -1.7
CDH19-204ENST00000579658 CXCL9Q07325 125 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 GSE1Q14687 1217 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 SULT6B1Q6IMI4 303 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 KRT26Q7Z3Y9 468 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 SULF1Q8IWU6 871 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 ZIC5Q96T25 663 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 TRIM66O15016 1216 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 RGS20O76081 388 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 GTF2E1P29083 439 aaPredicted RBP4.46□□□□□ -1.7
CDH19-204ENST00000579658 KIAA2012Q0VF49 1180 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 DCAF8Q5TAQ9 597 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 NBPF11Q86T75 865 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 HTATIP2Q9BUP3 242 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 CNOT7Q9UIV1 285 aaKnown RBP4.46□□□□□ -1.7
CDH19-204ENST00000579658 TBC1D2BQ9UPU7 963 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 ATP6V0A2Q9Y487 856 aa4.46□□□□□ -1.7
CDH19-204ENST00000579658 PSME4Q14997 1843 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 CCER2I3L3R5 266 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 PPP1R37O75864 691 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 RBM26Q5T8P6 1007 aaKnown RBP4.45□□□□□ -1.7
CDH19-204ENST00000579658 COL1A1P02452 1464 aaPredicted RBP4.45□□□□□ -1.7
CDH19-204ENST00000579658 ERVV-1B6SEH8 477 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 BBOX1O75936 387 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 NF2P35240 595 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 HIRAP54198 1017 aaPredicted RBP4.45□□□□□ -1.7
CDH19-204ENST00000579658 PRMT2P55345 433 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 PDE4DQ08499 809 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 RALBP1Q15311 655 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 OTUD7BQ6GQQ9 843 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 NKX2-3Q8TAU0 364 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 RNF166Q96A37 237 aaPredicted RBP4.45□□□□□ -1.7
CDH19-204ENST00000579658 PHACTR3Q96KR7 559 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 NIP7Q9Y221 180 aaKnown RBP eCLIP4.45□□□□□ -1.7
CDH19-204ENST00000579658 STXBP5LQ9Y2K9 1186 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 PTPN22Q9Y2R2 807 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 NR2E3Q9Y5X4 410 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 MYBBP1AQ9BQG0 1328 aaKnown RBP4.45□□□□□ -1.7
CDH19-204ENST00000579658 NUP98P52948 1817 aa4.45□□□□□ -1.7
CDH19-204ENST00000579658 MANSC4A6NHS7 340 aaPredicted RBP4.44□□□□□ -1.7
CDH19-204ENST00000579658 TEFQ10587 303 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 TCIRG1Q13488 830 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 ASTLQ6HA08 431 aaPredicted RBP4.44□□□□□ -1.7
CDH19-204ENST00000579658 ZNF790Q6PG37 636 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 SP8Q8IXZ3 490 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 MICALL2Q8IY33 904 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 TRPM4Q8TD43 1214 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 CDCA5Q96FF9 252 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 DUOX1Q9NRD9 1551 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 POTEFA5A3E0 1075 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 TRAK2O60296 914 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 GNRH1P01148 92 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 U2AF1L5P0DN76 240 aaPredicted RBP4.44□□□□□ -1.7
CDH19-204ENST00000579658 U2AF1Q01081 240 aaKnown RBP eCLIP4.44□□□□□ -1.7
CDH19-204ENST00000579658 SLC39A6Q13433 755 aa4.44□□□□□ -1.7
CDH19-204ENST00000579658 E2F4Q16254 413 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms